1L5F,1WX1


Conserved Protein Domain Family
DBI_PRT

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pfam02277: DBI_PRT 
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Phosphoribosyltransferase
This family of proteins represent the nicotinate-nucleotide- dimethylbenzimidazole phosphoribosyltransferase (NN:DBI PRT) enzymes involved in dimethylbenzimidazole synthesis. This function is essential to de novo cobalamin (vitamin B12) production in bacteria. Nicotinate mononucleotide (NaMN):5,6-dimethylbenzimidazole (DMB) phosphoribosyltransferase (CobT) from Salmonella enterica plays a central role in the synthesis of alpha-ribazole-5'-phosphate, an intermediate for the lower ligand of cobalamin.
Statistics
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PSSM-Id: 426694
Aligned: 409 rows
Threshold Bit Score: 167.561
Created: 26-Apr-2021
Updated: 29-Sep-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1L5F_A             11 IPAPDAEAMARTQQHIDGLLKPPGslGRLETLAVQLAGMPGLNGTpQVGeKAVLVMCADHGVW-DEGva--vSPKIVTAI 87  Salmonella...
CCZ54586            4 IQAPDKETMEACRLYVDNLIKPIHslGKLEDIAVRLAGITGKIKPgKLN-KAIIIMAGDTAVDgENK-----TGGKTSLT 77  Dialister ...
CDA50522            4 IPKLNQEIMEACQLYVDNLIKPIHslGKLEDMAVRMAGILGEVKPtYLN-KAVVIFGGDTAVDgENK-----TKGQLSHA 77  Dialister ...
WP_022382901        4 IPELNKEAMEACQLYVDNLIKPIHslGKLEEIAVRIAGVTGKVKPsYLN-KAIVIFGGDTASDgENK-----TKGQLSHD 77  Dialister ...
WP_014427022        9 aPTADPPLERALRDKLARRNDDSGslGELEPLALRIGLMQGSLKP-RFHePQLLIFAADHGLA-VDGlh--gALRYTTDE 84  Rubrivivax...
WP_011830702        9 aptahPRLEDALRQKLQHRAETAGslGELEPLAVRLGLIQNSLKP-RLKsPQLVVFAGDHGLV-VDGl---sTRGDSTSQ 83  Methylibium
jgi:Snas_4571      13 VPFPDAAYATRASNRLVEALVPGTglGTLTPAIAWSGRVQGTDAPrPFRdITGLIVSGGH----DGDfayadDPAD---- 84  Stackebran...
CeBiTec:AFR_09285 269 MPLPDSDAGPDARDRLANVDLPGAgiGMLIEAVEFAAATQSTSTPrPWGpVRVLLIDGRH----AGGaaagaDVEDSERR 344 Actinoplan...
WP_012014524      255 LPMPDEDAGSQAVERVATRDLPGAgfGGLTQLVEFAAATQGTPRPaPWGsIRMLLVHGDH----AGGvaagtAPGDSARR 330 Salinispor...
WP_013287724      288 lPMPDDYTGPQAVDRLATLDIPGAglGVLEQVVGFAAATQGTSTPrPWDsVRVLLIQGDH----EGGasagaTPGESGRR 363 Micromonos...
1L5F_A             88 QAANMTRGTTGVCVLAAQAGAKVHVIDVG-ID-AEPipgvvnM-RVARGCGNIAVGPAMSRLQAEALLLEVSRYTCDLAQ 164 Salmonella...
CCZ54586           78 EVQMVSRGLGTVSAVARTLGAPVYLIDVGlEQnTNDieg-vlTnKVVYGTH--RGNPALDQDAVSAAISIGMSVARTLAV 154 Dialister ...
CDA50522           78 EMKLVAQGAGPVNVLARQMEMPVYLVDVGlEKdTSDieg-ilAkKVIHGTH--QGHPAMDDDVAKAAISLGMSVGKALAG 154 Dialister ...
WP_022382901       78 EMKLVAQGAGPVNAAARMIDAPVYLIDVGlEQdTSDieg-vlTqKVIRGTH--FGHPAMDDEVTAAAISVGMSVGKTLAG 154 Dialister ...
WP_014427022       85 LVRRLLAGRLPLAVFARAGDLALTVVDCGvADtLPAher-llArKIAHGTRNPRVAAAMSVPQAHAAMRAGMEIGDQL-- 161 Rubrivivax...
WP_011830702       84 QVTHLLAGRLPMAVFSFIQGMGLTVVDAGlAEtMSPyps-llQrKIGFGTRSARSGPAMSIDQAHAAIRAGMEIADSL-- 160 Methylibium
jgi:Snas_4571      85 --------ESILTRLAERAGVSLRRLETV-------------------TGAAAETGPVLSEDQYLECLEIGKQAADASID 137 Stackebran...
CeBiTec:AFR_09285 345 AAQAEA-GEGALGTLAATADADIVVVRTP-------------------PSGAMEDGPVIDADTVDAALRQGWELADAAAD 404 Actinoplan...
WP_012014524      331 AQEARD-GQGAWARLAAEAGAELQVVDAP-------------------AADPIETDPALPLSQVEAALQLGWRLADQAAH 390 Salinispor...
WP_013287724      364 ARQARA-GRGPLARLAAENRAGLQIVEAP-------------------VAAPMEDGPALSADEVEAALGYGWRLAEQAAD 423 Micromonos...
1L5F_A            165 RGVTLFGVGELGMANTTPAAAMVSVFTGSDAKEVVGIganlpp----sridnKVDVVRRAIAINqpnpR-DG---IDVLS 236 Salmonella...
CCZ54586          155 QGIQAVGLGNIGERSLLSALGVTAAIMKKELQENSlkdg----------fslHMDDVGNMAn--------DP---VSVLS 213 Dialister ...
CDA50522          155 EGIQAVGLGNIGERSMLSALAVTTAVMKEDLKKASarsg----------fsiQLSDVGDFAk--------DP---VGTLA 213 Dialister ...
WP_022382901      155 QGIEVIGLGNIGERSMLSALAVTTAIMKEDLKKASektg----------falNISDVGDFAk--------DP---VGTLS 213 Dialister ...
WP_014427022      162 -RGNLTVCAGLGVGSQESAALLLSRITELPLRALLETgplmsp----eelahQLAVSQAALARHr--eVaEP---VELLA 231 Rubrivivax...
WP_011830702      161 -SGNVLACAGIGVGAHESASLVLSRLADIPLRDLTISgpdmpp----dalaqTMVVLQSTQGRHr--dVtDP---VEVLA 230 Methylibium
jgi:Snas_4571     138 SGADLLVLCGLGPGTRTAAIAVTAHLTRIPPVELSPRlrlpggviddnawmrRTAAIRDAFTRL----GgPGrkaQTMLT 213 Stackebran...
CeBiTec:AFR_09285 405 AGRDVLILGSCGAGTEAAATAVLAATTGAEPVAILPRvlvpggfyddnawmvRCAAVRDAMHRI----RqEPrgaKDILA 480 Actinoplan...
WP_012014524      391 AGVRLLVLGACGAGTDAAAAAVLAATAGAEPPAVLTRvrtdageyddaawmvRCAAVRDGLHRS----RhSSrgpKEILA 466 Salinispor...
WP_013287724      424 AGVQLLVLAACGAGAEAAAAAVLAATAGAEPPMVLGRvvteqgeiddtawmvRCAAVRDALHRT----RrSAreaKDVLA 499 Micromonos...
1L5F_A            237 KVGGFDLVGMTGVMLGAARCGLPVLLDGFLSYSAALAACQIAPAVRPYLIPSHFSAEKGARIALAHLSMEPYLHMAMRLG 316 Salmonella...
CCZ54586          214 RVGSAEIAGLFGLVVQAAREKIAIVFDNAVTGAAVLAAIEVYPEVRDYVFSSAAYNEPVHQIQMKKLGMKPFFYYDFTVA 293 Dialister ...
CDA50522          214 MVGSAEIAALFGLTVEAARRGIMVVFDNAVTGAAVLAAQAVYPEIKNYIFPSVYYEEPVHQMQMQKMGMKSFLHYDFTEA 293 Dialister ...
WP_022382901      214 IVGSAEIAALFGLVVEAARCNMMVVFDNAVTGAAVLGAVTAYPEIRNFVIPSVYYEEPVHQMQMQKLGMKSFLHYDFTEA 293 Dialister ...
WP_014427022      232 ALGGFEVAVMVGVMLMAASKRQLLMIDGLAACAALAMATRIAPPVLDYCVFSRSREHRGLDLVHKHFRAAVLPDLGLDGL 311 Rubrivivax...
WP_011830702      231 AFGGFEVATMVGAMLVAASKRHLIMVDGLPACAALLVAARISAPVTDYVVFCRSHGHRGLDHALNLFRASALLELGMEST 310 Methylibium
jgi:Snas_4571     214 ELGGPVMATLTGIIVAAAIRRTPMLIDGPVAAAAALVSRDFSLGAPKWCYAPDRIPHPVVERVAGQTGMAEPIGFGVDVG 293 Stackebran...
CeBiTec:AFR_09285 481 QLGGADLAVATGAMLGASARRMPVLVDGPLGIAAGLIARDISSQTRHWCLLADAGTHQLVKQGADVLGLTAVLELGLDLG 560 Actinoplan...
WP_012014524      467 EVGGGDIAVATGVLLGAAARRLPVLLDGPVGVAAGLVSRDLAGPARHWCLLADHGGHPGVQLAADVLGLAPLLDLRLDLG 546 Salinispor...
WP_013287724      500 ELGGGDIALATGVLLGATARKVPVLLDGPVGTAAAMVSRDLAGQARHWCLLPDHGGRPGVRLAADVLGLTPLVDLRLDLG 579 Micromonos...
1L5F_A            317 EGSGAALAMPIVEAACAMFHN 337 Salmonella enterica
CCZ54586          294 EGFGSAMGLSLFDAALDIVNE 314 Dialister invisus CAG:218
CDA50522          294 EGYGSALGLSLLDAAIDMLNQ 314 Dialister sp. CAG:486
WP_022382901      294 EGYGSALGLSLMDAAIDMLNQ 314 Dialister massiliensis
WP_014427022      312 DGTGAVLGWPLVRSAAALLTE 332 Rubrivivax gelatinosus
WP_011830702      311 DGTGSTLAWPLVHSAAALLTQ 331 Methylibium
jgi:Snas_4571     294 EGCAAMQAIPLLQQTLRLFDE 314 Stackebrandtia nassauensis DSM 44728
CeBiTec:AFR_09285 561 EGTNALAALPLLRSAIALASA 581 Actinoplanes friuliensis DSM 7358
WP_012014524      547 EGGNALVALPLLRSALALATA 567 Salinispora tropica
WP_013287724      580 EGATALAALPLLRSALTLAAT 600 Micromonospora aurantiaca
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