1L5F,1WX1


Conserved Protein Domain Family
DBI_PRT

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pfam02277: DBI_PRT 
Phosphoribosyltransferase
This family of proteins represent the nicotinate-nucleotide- dimethylbenzimidazole phosphoribosyltransferase (NN:DBI PRT) enzymes involved in dimethylbenzimidazole synthesis. This function is essential to de novo cobalamin (vitamin B12) production in bacteria. Nicotinate mononucleotide (NaMN):5,6-dimethylbenzimidazole (DMB) phosphoribosyltransferase (CobT) from Salmonella enterica plays a central role in the synthesis of alpha-ribazole-5'-phosphate, an intermediate for the lower ligand of cobalamin.
Statistics
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PSSM-Id: 460520
Aligned: 408 rows
Threshold Bit Score: 167.177
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1L5F_A             11 IPAPDAEAMARTQQHIDGLLKPPGSLGRLETLAVQLAGMPGLNGTpQVGEKAVLVMCADHGVW-DEG--VAVSPKIVTAI 87  Salmonella...
CCZ54586            4 IQAPDKETMEACRLYVDNLIKPIHSLGKLEDIAVRLAGITGKIKPgKLN-KAIIIMAGDTAVDgENK-----TGGKTSLT 77 
CDA50522            4 IPKLNQEIMEACQLYVDNLIKPIHSLGKLEDMAVRMAGILGEVKPtYLN-KAVVIFGGDTAVDgENK-----TKGQLSHA 77 
WP_022382901        4 IPELNKEAMEACQLYVDNLIKPIHSLGKLEEIAVRIAGVTGKVKPsYLN-KAIVIFGGDTASDgENK-----TKGQLSHD 77  Dialister ...
jgi:Snas_4571      13 VPFPDAAYATRASNRLVEALVPGTGLGTLTPAIAWSGRVQGTDAPrPFRDITGLIVSGGH----DGDfaYADDPAD---- 84 
CeBiTec:AFR_09285 269 MPLPDSDAGPDARDRLANVDLPGAGIGMLIEAVEFAAATQSTSTPrPWGPVRVLLIDGRH----AGGaaAGADVEDSERR 344
WP_012014524      255 LPMPDEDAGSQAVERVATRDLPGAGFGGLTQLVEFAAATQGTPRPaPWGSIRMLLVHGDH----AGGvaAGTAPGDSARR 330 Salinispor...
WP_013287724      288 lPMPDDYTGPQAVDRLATLDIPGAGLGVLEQVVGFAAATQGTSTPrPWDSVRVLLIQGDH----EGGasAGATPGESGRR 363 Micromonos...
WP_013735195      264 LPMPDEYAGPQAVERLATLDVPGRGFGVLAQVVSFAAGTQGTSTPqPWRSVRVLLLHGDH----QGGaaAGTLPGESGRR 339 Micromonos...
WP_014427022        9 aPTADPPLERALRDKLARRNDDSGSLGELEPLALRIGLMQGSLKP-RFHEPQLLIFAADHGLA-VDG--LHGALRYTTDE 84  Rubrivivax...
1L5F_A             88 QAANMTRGTTGVCVLAAQAGAKVHVIDVG-ID-AePIPgvvnM-RVARGCGNIAVGPAMSRLQAEALLLEVSRYTCDLAQ 164 Salmonella...
CCZ54586           78 EVQMVSRGLGTVSAVARTLGAPVYLIDVGlEQnTnDIEgv-lTnKVVYGTH--RGNPALDQDAVSAAISIGMSVARTLAV 154
CDA50522           78 EMKLVAQGAGPVNVLARQMEMPVYLVDVGlEKdTsDIEgi-lAkKVIHGTH--QGHPAMDDDVAKAAISLGMSVGKALAG 154
WP_022382901       78 EMKLVAQGAGPVNAAARMIDAPVYLIDVGlEQdTsDIEgv-lTqKVIRGTH--FGHPAMDDEVTAAAISVGMSVGKTLAG 154 Dialister ...
jgi:Snas_4571      85 --------ESILTRLAERAGVSLRRLETV-------------------TGAAAETGPVLSEDQYLECLEIGKQAADASID 137
CeBiTec:AFR_09285 345 AAQAEA-GEGALGTLAATADADIVVVRTP-------------------PSGAMEDGPVIDADTVDAALRQGWELADAAAD 404
WP_012014524      331 AQEARD-GQGAWARLAAEAGAELQVVDAP-------------------AADPIETDPALPLSQVEAALQLGWRLADQAAH 390 Salinispor...
WP_013287724      364 ARQARA-GRGPLARLAAENRAGLQIVEAP-------------------VAAPMEDGPALSADEVEAALGYGWRLAEQAAD 423 Micromonos...
WP_013735195      340 ADQARA-GQGVLARLAAEGAAGLQVIEAP-------------------TAAPIEHEPALTAEQVESALSYGWQLAEEAAD 399 Micromonos...
WP_014427022       85 LVRRLLAGRLPLAVFARAGDLALTVVDCGvADtLpAHErl-lArKIAHGTRNPRVAAAMSVPQAHAAMRAGMEIGDQL-- 161 Rubrivivax...
1L5F_A            165 RGVTLFGVGELGMANTTPAAAMVSVFTGSDAKEVVGI----GANLPPSRIDNKVDVVRRAIAINQPnpR-DG---IDVLS 236 Salmonella...
CCZ54586          155 QGIQAVGLGNIGERSLLSALGVTAAIMKKELQENS----------LKDGFSLHMDDVGNMAn--------DP---VSVLS 213
CDA50522          155 EGIQAVGLGNIGERSMLSALAVTTAVMKEDLKKAS----------ARSGFSIQLSDVGDFAk--------DP---VGTLA 213
WP_022382901      155 QGIEVIGLGNIGERSMLSALAVTTAIMKEDLKKAS----------EKTGFALNISDVGDFAk--------DP---VGTLS 213 Dialister ...
jgi:Snas_4571     138 SGADLLVLCGLGPGTRTAAIAVTAHLTRIPPVELSPRlrlpGGVIDDNAWMRRTAAIRDAFTRL----GgPGrkaQTMLT 213
CeBiTec:AFR_09285 405 AGRDVLILGSCGAGTEAAATAVLAATTGAEPVAILPRvlvpGGFYDDNAWMVRCAAVRDAMHRI----RqEPrgaKDILA 480
WP_012014524      391 AGVRLLVLGACGAGTDAAAAAVLAATAGAEPPAVLTRvrtdAGEYDDAAWMVRCAAVRDGLHRS----RhSSrgpKEILA 466 Salinispor...
WP_013287724      424 AGVQLLVLAACGAGAEAAAAAVLAATAGAEPPMVLGRvvteQGEIDDTAWMVRCAAVRDALHRT----RrSAreaKDVLA 499 Micromonos...
WP_013735195      400 AGVQLLVLAACGAGTEAAAAAVLAATAGAEAPAVLARvineSGEFDDASWMIRCAAIRDALHRT----RgVArdaKEVLA 475 Micromonos...
WP_014427022      162 -RGNLTVCAGLGVGSQESAALLLSRITELPLRALLET----GPLMSPEELAHQLAVSQAALARHRE--VaEP---VELLA 231 Rubrivivax...
1L5F_A            237 KVGGFDLVGMTGVMLGAARCGLPVLLDGFLSYSAALAACQIAPAVRPYLIPSHFSAEKGARIALAHLSMEPYLHMAMRLG 316 Salmonella...
CCZ54586          214 RVGSAEIAGLFGLVVQAAREKIAIVFDNAVTGAAVLAAIEVYPEVRDYVFSSAAYNEPVHQIQMKKLGMKPFFYYDFTVA 293
CDA50522          214 MVGSAEIAALFGLTVEAARRGIMVVFDNAVTGAAVLAAQAVYPEIKNYIFPSVYYEEPVHQMQMQKMGMKSFLHYDFTEA 293
WP_022382901      214 IVGSAEIAALFGLVVEAARCNMMVVFDNAVTGAAVLGAVTAYPEIRNFVIPSVYYEEPVHQMQMQKLGMKSFLHYDFTEA 293 Dialister ...
jgi:Snas_4571     214 ELGGPVMATLTGIIVAAAIRRTPMLIDGPVAAAAALVSRDFSLGAPKWCYAPDRIPHPVVERVAGQTGMAEPIGFGVDVG 293
CeBiTec:AFR_09285 481 QLGGADLAVATGAMLGASARRMPVLVDGPLGIAAGLIARDISSQTRHWCLLADAGTHQLVKQGADVLGLTAVLELGLDLG 560
WP_012014524      467 EVGGGDIAVATGVLLGAAARRLPVLLDGPVGVAAGLVSRDLAGPARHWCLLADHGGHPGVQLAADVLGLAPLLDLRLDLG 546 Salinispor...
WP_013287724      500 ELGGGDIALATGVLLGATARKVPVLLDGPVGTAAAMVSRDLAGQARHWCLLPDHGGRPGVRLAADVLGLTPLVDLRLDLG 579 Micromonos...
WP_013735195      476 QLGGGDIAVATGVLLGATARRTPVLLDGPVGVAAALVSRDLAGQARHWCLLADDGDQPAVRLAADVLGLTPLAQLKLDLG 555 Micromonos...
WP_014427022      232 ALGGFEVAVMVGVMLMAASKRQLLMIDGLAACAALAMATRIAPPVLDYCVFSRSREHRGLDLVHKHFRAAVLPDLGLDGL 311 Rubrivivax...
1L5F_A            317 EGSGAALAMPIVEAACAMFHNMGELAA 343 Salmonella enterica
CCZ54586          294 EGFGSAMGLSLFDAALDIVNEMKTFGQ 320
CDA50522          294 EGYGSALGLSLLDAAIDMLNQMKTFGS 320
WP_022382901      294 EGYGSALGLSLMDAAIDMLNQMKTFGS 320 Dialister massiliensis
jgi:Snas_4571     294 EGCAAMQAIPLLQQTLRLFDELpfpep 320
CeBiTec:AFR_09285 561 EGTNALAALPLLRSAIALASAlpvhpa 587
WP_012014524      547 EGGNALVALPLLRSALALATAlpahps 573 Salinispora tropica
WP_013287724      580 EGATALAALPLLRSALTLAATlpvhps 606 Micromonospora aurantiaca
WP_013735195      556 EGANALTVLPVLRSALTLAAAlpsrpd 582 Micromonospora maris
WP_014427022      312 DGTGAVLGWPLVRSAAALLTEVAEGEE 338 Rubrivivax gelatinosus
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