1NVP


Conserved Protein Domain Family
TFIIA_gamma_N
?
pfam02268: TFIIA_gamma_N 
Click on image for an interactive view with Cn3D
Transcription initiation factor IIA, gamma subunit, helical domain
Accurate transcription in vivo requires at least six general transcription initiation factors, in addition to RNA polymerase II. Transcription initiation factor IIA (TFIIA) is a multimeric protein which facilitates the binding of TFIID to the TATA box. The N-terminal domain of the gamma subunit is a 4 helix bundle.
Links
?
Statistics
?
PSSM-Id: 426690
Aligned: 64 rows
Threshold Bit Score: 57.0795
Created: 26-Apr-2021
Updated: 29-Sep-2021
Structure
?
Program:
Drawing:
Aligned Rows:
Download Cn3D
PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection: 
1NVP_D         2 YQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINAAL 47  human
EDW43770       3 YQHYRATTLGSTLQETLDEMMERGDITQEIVNLVLQKYDKSVTSAL 48  Drosophila sechellia
Q9W5B9         3 YQHYRATTLGRTLQDTLDEMMERGDITKKIANLVLLRYDKSISTAL 48  fruit fly
EGD81618       4 nDHYRKTSLGLALQAALDELLEAQSISPDLMNHVLENFDTTMVKRL 49  Salpingoeca rosetta
EDP06523       3 FQIYRNTSVGESLMETIEQMAQEEKLTEEIALAVLKQFDTSMSKAI 48  Chlamydomonas reinhardtii
PDM68280       6 YQLYRETTMGMALTEVLDQMIEDHLIPKTLAMKVLGTFDKNMNKAL 51  Pristionchus pacificus
1_pfamImport   2 YQLYRNTTLGQALQKTLDDFVSEQLIPDSLAKRVMDQFDKSINKTL 47 
EGT39837       4 YALYRGTTLGQALEQTLSDMDDEGLLPKSLVNKILFQFDKSMNKQI 49  Caenorhabditis brenneri
Q9BIB4         4 YALYRGTTLGQALDKTLEDMESEGLLTKSLASKVLQQFDKSMNKQI 49  Caenorhabditis elegans
KJE97049       2 tELFRETVLGKALIDILNEMVHAGALQSKLALEVLEHFDQVVEHTL 47  Capsaspora owczarzaki ATCC 30864
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap