1NVP


Conserved Protein Domain Family
TFIIA_gamma_N

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pfam02268: TFIIA_gamma_N (This model is not part of the current CDD release)
Transcription initiation factor IIA, gamma subunit, helical domain
Accurate transcription in vivo requires at least six general transcription initiation factors, in addition to RNA polymerase II. Transcription initiation factor IIA (TFIIA) is a multimeric protein which facilitates the binding of TFIID to the TATA box. The N-terminal domain of the gamma subunit is a 4 helix bundle.
Statistics
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PSSM-Id: 514825
Aligned: 63 rows
Threshold Bit Score: 57.4745
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1NVP_D         2 YQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINAAL 47  human
C4QGM3         4 HEMYRSTTLGTTLREALDEMLAHNLLQPGMDHKVMQKFDQCISNAL 49  Schistosoma mansoni
KAF8359508     6 YQLYRETTMGMALTEVLDQMIEDHLIPKTLAMKVLGTFDKNMNKAL 51 
1_pfamImport   2 YQLYRNTTLGQALQKTLDDFVSEQLIPDSLAKRVMDQFDKSINKTL 47 
EGT39837       4 YALYRGTTLGQALEQTLSDMDDEGLLPKSLVNKILFQFDKSMNKQI 49 
Q9BIB4         4 YALYRGTTLGQALDKTLEDMESEGLLTKSLASKVLQQFDKSMNKQI 49  Caenorhabditis elegans
XP_004343407   2 tELFRETVLGKALIDILNEMVHAGALQSKLALEVLEHFDQVVEHTL 47 
EED41777       3 YEFYRSTIIGRALLDTIDEKVRSNVITPEQGIQIAQKFDEVIPRif 48 
EJW05342       2 YTFYRKSLVGKALAEALEQKINDNEITAQQARAIMEKFDSVIPNVf 47 
XP_004996822   4 nDHYRKTSLGLALQAALDELLEAQSISPDLMNHVLENFDTTMVKRL 49 
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