4LIF,4FB3


Conserved Protein Domain Family
T_Ag_DNA_bind

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pfam02217: T_Ag_DNA_bind (This model is not part of the current CDD release)
Origin of replication binding protein
This domain of large T antigen binds to the SV40 origin of DNA replication.
Statistics
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PSSM-Id: 514788
Aligned: 13 rows
Threshold Bit Score: 133.209
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4LIF_A   8 KDFPVDLHAFLSQAVFSNRTVASFAVYTTKEKAQILYKKLm-----EKYSVTFISR-HGFGGHNI-LFFLTPH-RHRVSA 79  JC polyomavirus
P03075 261 DDFPTILRGFLSHAIFSNKTQNAFIIYSTKEKCEVLYEQI------DKYNPDYKGI-FIMKQTEAfVMFMTPG-KHRVAA 332 Alphapolyomavirus mau...
P12905 285 SDFPSSLTGYLSHAIYSNKTFPAFLVYSTKEKCKQLYDTI------GKFRPEFKCL-VHYEEGGM-LFFLTMT-KHRVSA 355 Mouse polyomavirus (s...
Q9DPC0 137 KDFPVDLHAFLSQAVFSNKTVASFAVYTTKEKAQILYKKLm-----EKYSVTFISR-HGFGGHNI-LFFLTPQ-RHRVSA 208 JC polyomavirus
Q9J7C9 136 KDFPSELLSFLSHAVFSNRTLACFAIYTTKEKAALLYKKIm-----EKYSVTFISR-HNSYNHNI-LFFLTPH-RHRVSA 207 Macaca mulatta polyom...
Q20HX6 120 IDLPASIEACLLTAKSVQSCPDAHLIITTCNKLQNLRPQLm-----TNFTTRGHIQ-AVWDSSYA-LFVILMErPTRVST 192 Finch polyomavirus
Q80FI2 134 IPLPDAVESCLLAKKSIQSCPEVHLLITSNSKLQELQPLIl-----QHFSTKGYVT-AQWAGGYAfMLIILAN-STRVST 206 Goose hemorrhagic pol...
Q20HY2 139 ICLPADVEACLLAAKSIQSCPEGHLVVTTHQKLQELQSSLl-----NHFDTAGHLV-CKWGTDFAiMLIILTT-GTRIST 211 Crow polyomavirus
P24851 129 PDFPEVLKEYVSNALFTNRTYNCFIIFTTAEKGKELYPCIq-----AAYKCTFIAL-YMYNGDSV-LYIITVG-KHRVNA 200 Epsilonpolyomavirus b...
P04008 200 DDFPVCLYSFLSHAIYSNKTMNSFLIYTTLEKARQLYKTVekskivVDFKASFSYQ-DEEGEGCL-LFLITLG-KHRVSA 276 B-lymphotropic polyom...
P24597 151 NDMPADLMEYLSCAILSNKTLPCFLIYTTLEKVELLYNKLs----eEVLSPRFNQVdHKYGRKYVpIFIITGT-KHRVSA 225 Kilham polyomavirus
4FB3_A   8 SDFPSSLTGYLSHAIYSNKTFPAFLVYSTKEKCKQLYDTI------GKFRPEFKCL-VHYEEGGM-LFFLTMT-KHRVSA 78  Alphapolyomavirus muris
P13894  99 lkkcmqtyfsvnerRKQQSCPDCHLLITSITKMPQLKAHLy-----EHFGIKGHIV-AHWTGIAL-LVLQLEK-PTRIST 170 Gammapolyomavirus avis
4LIF_A  80 INNYCQKLCTFSFLICKGVNKE 101 JC polyomavirus
P03075 333 VKSYCCKFCTVSFLLCKAVTKP 354 Alphapolyomavirus mauratus
P12905 356 VKNYCSKLCSVSFLMCKAVTKP 377 Mouse polyomavirus (strain Crawford small-plaque)
Q9DPC0 209 INNYCQKLCTFSFLICKGVNKE 230 JC polyomavirus
Q9J7C9 208 INNYAQKLCTFSFLICKGVNKE 229 Macaca mulatta polyomavirus 1
Q20HX6 193 VGNFCKKHCTVSLCIVRGIKKN 214 Finch polyomavirus
Q80FI2 207 LINFCCKHCTVSPYVVRGVKKH 228 Goose hemorrhagic polyomavirus
Q20HY2 212 VLNFCKKHCTVSPLCVRGLKKH 233 Crow polyomavirus
P24851 201 MENLCSKKCTVSFLQAKGVLKP 222 Epsilonpolyomavirus bovis
P04008 277 VKHFCVSQCTFSFIHCKAVVKP 298 B-lymphotropic polyomavirus
P24597 226 VFNYCATYCSVSFIVVKGVIKE 247 Kilham polyomavirus
4FB3_A  79 VKNYCSKLCSVSFLMCKAVTKP 100 Alphapolyomavirus muris
P13894 171 VHNFCKKYCTISICSVRGIKKN 192 Gammapolyomavirus avis
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