7MRM,7MQY


Conserved Protein Domain Family
APP_N

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pfam02177: APP_N (This model is not part of the current CDD release)
Amyloid A4 N-terminal heparin-binding
This N-terminal domain of APP, amyloid precursor protein, is the heparin-binding domain of the protein. this region is also responsible for stimulation of neurite outgrowth. The structure reveals both a highly charged basic surface that may interact with glycosaminoglycans in the brain and an abutting hydrophobic surface that is proposed to play an important functional role such as in dimerization or ligand-binding. Structural similarities with cysteine-rich growth factors, taken together with its known growth-promoting properties, suggest the APP N-terminal domain could function as a growth factor in vivo.
Statistics
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PSSM-Id: 514755
Aligned: 21 rows
Threshold Bit Score: 159.777
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
7MRM_B       227 EPQIAMFCGKL------------NMHMNvQNGKWESDPSGT---KTCIDTKEGILQYCQEVYPELQITNVVEANQPVTIQ 291  chicken
EDO45291      31 EPLVAMWCGKV------------NQHMDiNTGEWATDENGH---SMCSTSTKQVLKYCQHVYPKLNVSNVVEANMNVTIK 95  
XP_045095461  35 IPMVAFSCGYR------------NQYMT-EEGTWKTDDERY---ATCFSGKLDILKYCRKAYPTMNITNIVEYSHEVSIS 98  
EEC20285      11 QPMVALLCGHGri---------nNQYLA-EGQRWVSDPDPK---AVCSKDKLSILEYCRKVYPKRDIRNIVESSRYYHVD 77  
XP_015791357  51 QPMVAMLCGRGkf---------hNQYLD-ENKRWVSDPDPK---AVCTKDKLEILEYCRKVYPKKDIRNIVEYSKYMVVD 117 
6_pfamImport   1 EPQVAMLCHTKeds-------yhSQYMT-ESGRWTTDTTHK---FTCPKEKMDILDYCKKVYPKHDITNIVESSHFIKIS 69  
XP_002426949  17 EPQVAILCESGsgseqqktqayhSQYMT-EQGKWITDINNK---ATCLKDKMDILDYCKKVYPKRDVTNIVEASHYLKVP 92  
EFX86398      42 EPQVAVVCDLRnp--------lhPQYMD-STGKWVSDLENK---SYCLKDKIEILDFCRKVYRGRNITNIVEAPRSVKID 109 
XP_002055698  32 EPQIAVLCEAGqi--------yqPQYLS-EEGRWVTDLSKKttgATCLRDKMDLLDYCKKAYPNRDITNIVESSHYQKIG 102 
XP_039768164  63 DPQVALGCGTL------------SLHRDlRTGQWQPDPQRS---HGCFRGPHQVLAYCQQMYPELRVGRV-EAAEPIPMA 126  platypus
7MRM_B       292 NWCKR---GWKQCNGHpH-IVVPYRCLVGEFVSDALLVPD 327  chicken
EDO45291      96 TWCDP---KNVNCNAT-K-TVLPYRCLVGKFEADALLVPP 130 
XP_045095461  99 DWCRE---EGSPCKWT-H-SVRPYHCIDGEFHSEALQVPH 133 
EEC20285      78 GWCKVg-qRGRSCRGS-H-WVKPYRCLEGDFQSDALLVPE 114 
XP_015791357 118 NWCKFg----qKCGGR-H-LVKPYRCLEGPFQSDALLVPA 151 
6_pfamImport  70 NWCRVg-hT--KCKRT-A-WVKPFRCLEGPFQSDALLVPE 104 
XP_002426949  93 NWCKVg-hK--KCKIS-R-WVKPFRCLEGPFQSDALLVPE 127 
EFX86398     110 NWCKLg-hR--KCKTT-Q-SVKPYRCL-GAFQSEALLVPE 143 
XP_002055698 103 GWCRQgslNAAKCKGA-HrWIKPFRCLEGPFQSDALLVPE 141 
XP_039768164 127 RWCRGa--PGERC-PH-H-VIVPYRCLPGEFVSDALLVPE 161  platypus
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