2CRU,6IQC,2JXN,6VMT


Conserved Protein Domain Family
dsDNA_bind

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pfam01984: dsDNA_bind (This model is not part of the current CDD release)
Double-stranded DNA-binding domain
This domain is believed to bind double-stranded DNA of 20 bases length.
Statistics
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PSSM-Id: 514637
Aligned: 181 rows
Threshold Bit Score: 74.4318
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2CRU_A         8 LRRQRLAEL--QAKHGDPg--DAAQQEAKHREAEMRNSILAQVLDQSARARLSNLALVKPEKTKAVENYLIQMARYGQLS 83  human
WP_008085390   9 IKRRKMLEL--MQQQVLAqe--nNDEQKRLEEEAARQAILRQILEPEARERLARLKLVRPELANAVENQLILLAQSGRIG 84  Candidatus Acid...
EQB64634      10 IKRKRLADL--QNQAAANqamqdREEIQRKAAEKERQDIVKRFVTPEAYERLTNVKLVRPELVENVENQIIMLAQSGRLN 87 
Q9HM19        10 IRRQQLESM--QRQAMQEqm-reEQEKQREAERARRQQILRQILDPSARERLNNVRLVRPDLADNVENQLIQLASMGRIN 86  Thermoplasma ac...
EQB65125      10 LRRRKMEEI--QRSNSERqm-seEQQKAQEAEKARRQQILRQILDPEARERLANVRLVKPDLAENVESQLIQLYSMGRIN 86 
EQB70868      10 LRRRKLLEM--QRNSQEQqe-ieEQRRMQEAEKARKQQILRQILAPDARERLANVRLVRPDLAENVENQLVQLASMGRIN 86 
8_pfamImport   1 IRKKKLMEL--QKRMEEEr----KAEELRKKQQLVKETILKSILTSEARARLANVKLVRPELAEQVENYLIALAQAGRIA 74 
WP_012215835  10 LKAKRLAEM--QKNINTRqdsEKTPEQTQEKPPENPRDILVKVLGFRGLEVLQNAESQFPNETAMIVQKLSELIKSGELN 87  Nitrosopumilus ...
6IQC_A         7 yddeeLEELlrRKAAQEQk-rIEEERKRKAELESQKESILRVILTPEARQRLTNIKLVKPEFAESLENQLIALAQSGRIK 85  Saccharolobus s...
Q6L2L3        10 IRRRKMAEY--QNMMQERay-eeEQKKAAAEEEARRQQILRQILSPEARERLSRLKLVRPDLVENVENQLIQLAGMGRIN 86  Picrophilus osh...
2CRU_A        84 EKVSEQGLIEILKKVSQ-QtEKtTTVKFNR 112 human
WP_008085390  85 RMITDEELKSILSRLTS-Q-RReIRI--ER 110 Candidatus Aciduliprofundum boonei
EQB64634      88 RLITDAEVKSLLARLS--E-KReTKI--ER 112
Q9HM19        87 RMLSERDIIDILSKLTE-N-KRePKI--ER 112 Thermoplasma acidophilum DSM 1728
EQB65125      87 RIITDPEIRDILSKMTE-T-RReTKI--ER 112
EQB70868      87 RLLTDSDIRDILAKLTE-K-KReTRI--ER 112
8_pfamImport  75 RPLTDAEVKEILARLAGeT-RReGRINIKE 103
WP_012215835  88 ETIDGGKLMTLFRAVGLhI-RMeTKINVEQ 116 Nitrosopumilus maritimus
6IQC_A        86 IPITDEELKQILEQISQ-QnRRdFKIQIRE 114 Saccharolobus solfataricus P2
Q6L2L3        87 KVISDNELKSILLRLTE-N-RHeTRI--ER 112 Picrophilus oshimae DSM 9789
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