3J8G,3J8G,4DCS,5DN8,6XRS,6XRS,1UDX,7BL3,7OI6,3GEE,7YLA


Conserved Protein Domain Family
MMR_HSR1

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pfam01926: MMR_HSR1 (This model is not part of the current CDD release)
50S ribosome-binding GTPase
The full-length GTPase protein is required for the complete activity of the protein of interacting with the 50S ribosome and binding of both adenine and guanine nucleotides, with a preference for guanine nucleotide.
Statistics
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PSSM-Id: 514603
Aligned: 684 rows
Threshold Bit Score: 46.8379
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3J8G_X   5 VALVGRPNVGKSTLFNRLTR--T-RdA--LVADFPGLTRDRKYGRAE-IE--G--RE-FICIDTGGid-------gT-E- 64  Escherichia coli K-12
Q7VSW8   8 IAVVGHTNTGKTSLLRTLTRnpD-F-G--EVADQPGTTRHVEGARLA-ID--Na-AA-IEWFDTPGmedsialleyL-E- 76  Bordetella pertussis
Q88AF1  12 LAVVGHTNVGKTSLLRTLTG--D-V-SfgEVSHRPSTTRHVEGARLS-VD--GqaLL--ELYDTPGledaialldyL-E- 80  Pseudomonas syringae ...
Q9RFR9  56 IALLGAFSDGKTSVIAAWLG---------KVMDDMNISMDESSDRLSiYKpeGl-PDqCEIVDTPGl---------F-G- 114 Escherichia coli
Q8DK63 131 IVVFGTGSAGKTSLVNALLG--EmV-G--EVAPTMGTTEVGRTYRFWlPH--Ae-RE-ILITDTPGi---------L-Ea 191 Synechococcus elongatus
P74555 132 LVVFGTGSAGKTSLVNALLG--QiQ-G--EVAPTMGTTIAGEKYYLY-LD--Gv-SRdLEITDTPGi---------LeAg 193 Synechocystis sp. PCC...
Q8YQN3 134 VVVFGTGSAGKTSLVNAIMG--RmV-G--KVDAPMGTTQVGETYCLR-LK--Gl-ERkILITDTPGi---------LeAg 195 Nostoc sp. PCC 7120
Q7U7A7 135 VVVFGTGSSGKTSLIRALLQ--DmV-G--DVAAAMGSTRSTPSYRLR-LK--Gm-ERgLRLVDTPGi---------L-E- 194 Synechococcus sp. WH ...
Q7V7Y2 136 VVVFGTGSSGKTSLIRALLN--EmV-G--EVGAPMGSTTSSQIYRLR-LK--Gl-DRgLQLADTPGi---------L-E- 195 Prochlorococcus marin...
Q7VBQ9 124 VAVFGPGSSGKTALVRSLLN--KiV-G--HVAPSMGSTTKTNIYRLK-LK--Sl-RRgLKIIDTPGi---------L-E- 183 Prochlorococcus marinus
3J8G_X  65 DGVETR-M---------------------------AEQSLLAIE------E---A--DVVLFMVD-----Ar-----Ag- 94  Escherichia coli K-12
Q7VSW8  77 ----RL-QapgerldgparvrrflespeahrrfeqEARVLRKLL------E---C--DAGLYVIDa----Rdp--vlGk- 133 Bordetella pertussis
Q88AF1  81 ----RL-DrpgerldgparlarflegsearqrfeqEAKVMRQLL------A---S--DAGLYVIDa----Rep--vlAk- 137 Pseudomonas syringae ...
Q9RFR9 115 DKEREVdGrlvm--------------------yedLTRRYIS--------E---A--HLIFYVVDa----TnplkesHsd 157 Escherichia coli
Q8DK63 192 -------G---------------------------VAGTYREQRarqlaaE---A--DLLLFVLDd----Dlr--qsE-- 224 Synechococcus elongatus
P74555 194 VRGTEReT---------------------------AARQLAT--------E---A--DLLLFVVDndlrqS------E-- 225 Synechocystis sp. PCC...
Q8YQN3 196 VAGTEReQ---------------------------LARALAT--------E---A--DLLLFVVDndlrrS------E-- 227 Nostoc sp. PCC 7120
Q7U7A7 195 ---AGDgG---------------------------LNREERARQ------Qa--VraDLLLVVVD-----G------D-- 223 Synechococcus sp. WH ...
Q7V7Y2 196 ---AGRaG---------------------------LSREKEARQ------RasrA--DLMVVVVDc----Dlr--asE-- 229 Prochlorococcus marin...
Q7VBQ9 184 GGVHGRsR---------------------------EKEAIIKAS------Q---A--DLIIFVVD-----S------D-- 212 Prochlorococcus marinus
3J8G_X  95 ---LMPA----D-----EAIAKHLrsreKPTFL-VANK 119 Escherichia coli K-12
Q7VSW8 134 ---HRDE----L-----AILASCA----RPLLP-VLNF 154 Bordetella pertussis
Q88AF1 138 ---YRDE----L-----AVLASCG----KPLLP-VLNF 158 Pseudomonas syringae pv. tomato
Q9RFR9 158 ivkW--V----L-----RDLNKLS-----STIF-VINK 178 Escherichia coli
Q8DK63 225 ---YTPL----------VNLVEMG----KRSLL-VLNK 244 Synechococcus elongatus
P74555 226 ---YEPL----------QALAKIG----KRSLL-ILNK 245 Synechocystis sp. PCC 6803
Q8YQN3 228 ---YEPL----------KSLAEIG----KRSLL-VLNK 247 Nostoc sp. PCC 7120
Q7U7A7 224 ---LRS-----SemtvlRTLAGLG-----KRLLlVLNK 248 Synechococcus sp. WH 8102
Q7V7Y2 230 ---LEVI----------SNLANLG----KRLLL-VLNK 249 Prochlorococcus marinus str. MIT 9313
Q7VBQ9 213 ---LRSYememI-----VNLSKVG-----KKLFiVLNK 237 Prochlorococcus marinus
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