1WSC


Conserved Protein Domain Family
AMMECR1

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pfam01871: AMMECR1 (This model is not part of the current CDD release)
AMMECR1
This family consists of several AMMECR1 as well as several uncharacterised proteins. The contiguous gene deletion syndrome AMME is characterised by Alport syndrome, midface hypoplasia, mental retardation and elliptocytosis and is caused by a deletion in Xq22.3, comprising several genes including COL4A5, FACL4 and AMMECR1. This family contains sequences from several eukaryotic species as well as archaebacteria and it has been suggested that the AMMECR1 protein may have a basic cellular function, potentially in either the transcription, replication, repair or translation machinery.
Statistics
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PSSM-Id: 514561
Aligned: 300 rows
Threshold Bit Score: 108.317
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1WSC_A          22 KIARDSI-Anklgilkinl--edylsslndpILNKK-GLAFVTLETYYGNstsLRGCIGYVEa-VAPLKEIVSKAAIAAA 96  Sulfurisphaer...
WP_013386944    10 QVALSSImEnfakeek--------ilsipdeL-KVK-AACFVTLHKINGE---LRGCIGTLEpfRENLYEEIWGNAKSAA 76  Ilyobacter po...
WP_012446726    12 YLAREGL-Khylryekyl-----eppeemppLFYTK-RGTFVSLKEKDDN---LRGCIGTLEatQNNLAQEIIQNAVSAG 81  Natranaerobiu...
WP_012544216    11 ELAKKAL-Etfvltgkvi-----papeplpeLFSGR-AGCFVTLM-ENGE---LRGCIGTIEpvYDNLALEIINNAIAAG 79  Coprothermoba...
WP_006301058   272 lLARRAL-EeglrgkaadpeallpqrsaqagLWDRR-RACFVSLHRRDGS---LRGCIGTLEplCPSLDQEIIRNALAAA 346 Aminomonas pa...
jgi:Anamo_0709 279 RLARLSV-EhylktkqvldpsqafslspqvdLWSKR-RGCFVSIKRLDGS---LRGCIGTISpvRENLASEIIYNALAAA 353
WP_014163177     9 fLARRSI-Eawlinrekid--vkafpleewdESLLRpSGCFVSLKKKDGS---LRGCIGTISpvYDCLADEIAANARSAA 82  Thermovirga l...
Q24XA3         257 QWARQCL-Aaylktgttq-----gltppdvpLLKLR-RPCFVTLH-KEGE---LRGCIGTTApyRENLAQEIEHNALAAG 325 Desulfitobact...
WP_015045325   257 GYARECL-Tyyltsqpfd-----rlnipgdpLLKEK-KGCFVSLK-KDGT---LRGCIGTIQpvRENLASEIRHNAIAAG 325 Dehalobacter ...
WP_013625804   257 GYARECL-Ehhlhaqafd-----klhipgdpLLKEK-KACFVTLK-KDGE---LRGCIGTVQpaRENLAAEIRHNAIAAG 325 Syntrophobotu...
1WSC_A          97 FSDPRFPPLSKGEFDNIIIEVTVLTKPQEIdvenrwelpKKIKVGEDGLIVEY---GilYSGLLLPQVpxeycwDEETFL 173 Sulfurisphaer...
WP_013386944    77 YDDPRFPPLREYELEEIEISVDVLEKAEKIdk------iEKLDPKIYGVIVSS---Rg-RRGVLLPDIeg--vdSPEKQV 144 Ilyobacter po...
WP_012446726    82 VRDPRFPPVKLTELDDIKVSVDIISPLEKVsg------lDQLDPSKYGLVVEK---Gy-RRGVLLPDLeg--inTPKEQL 149 Natranaerobiu...
WP_012544216    80 TEDPRFPPVRADELPYLDYTVEVLGPLELVrd------lSELDPRVYGVVVQSsvrPl-RKGVLLPDIeg--vdTVDEQI 150 Coprothermoba...
WP_006301058   347 TQDPRFPPVRSEELEDLHLSVDVLSTPE-Stn------rSGLDPRIYGVLVQA---Rg-RRGVLLPDLeg--vdTVEQQV 413 Aminomonas pa...
jgi:Anamo_0709 354 FEDPRFMPLSEEELTGVRFSVDVLSDLELVas------vDELDPKVYGVVVEK---Gl-RKGVLLPDLeg--vdTVEYQL 421
WP_014163177    83 TSDPRFLPMNKDELPEIVVSVDVLSPLERIhs------lDMLNPKKYGIVISK---Gf-SKGVLLPDLpg--vnTVEDQI 150 Thermovirga l...
Q24XA3         326 KDDPRFWPVEAEELPALTITVDVLGEMEKIsg------lEELDPWRYGVVVRS---Rg-RTGLLLPRLeg--vnTAQEQV 393 Desulfitobact...
WP_015045325   326 TQDPRFWPIQAEELPLISVSVDVLGDTEKItg------pEELDPQRYGVVVRR---Gg-KVGLLLPHLeg--idTVEEQV 393 Dehalobacter ...
WP_013625804   326 TQDPRFWPVQPDELKLLRISVDVLSDPQKItg------sEELDPQLYGVIIRC---Gg-KVGLLLPRLeg--ieTVEEQI 393 Syntrophobotu...
1WSC_A         174 AETCIKAGLEPdcwlNNKVKIKKFQGIIF 202 Sulfurisphaera tokodaii
WP_013386944   145 SIAREKGGILPg---E-NADIYRFQVKRY 169 Ilyobacter polytropus
WP_012446726   150 AISAQKAGLSPs---DSNLTLYRFEVTRF 175 Natranaerobius thermophilus
WP_012544216   151 RICRLKAGISGs---E-PIILYRFRTEKF 175 Coprothermobacter proteolyticus
WP_006301058   414 EIAARKAGLDPr---E-PLELLRFRVERy 438 Aminomonas paucivorans
jgi:Anamo_0709 422 EIAAQKAGISs----LKGAKIYRFTVERY 446
WP_014163177   151 KIAMMKAGIASl---E-GATIERFTVRRY 175 Thermovirga lienii
Q24XA3         394 TIAKHKAGLGLn---E-PVEMWRFEVVRy 418 Desulfitobacterium hafniense Y51
WP_015045325   394 VIAKQKAGIDSe---E-EVELWRFEVERF 418 Dehalobacter sp. CF
WP_013625804   394 RIVRQKAGIWPe---E-EVELWRFEVERF 418 Syntrophobotulus glycolicus
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