6AHR,6AH3,6K0A,1OQK,1TSF


Conserved Protein Domain Family
RNase_P-MRP_p29

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pfam01868: RNase_P-MRP_p29 (This model is not part of the current CDD release)
Ribonuclease P/MRP, subunit p29
This family consists of several archaeal and eukaryotic proteins. The archaeal proteins are found to be expressed within ribosomal operons and several of the sequences are described as ribonuclease P protein subunit p29 proteins. The structure of the RNase P subunit, Rpp29, from Methanobacterium thermoautotrophicum has been determined. Mth Rpp29 is a member of the oligonucleotide/oligosaccharide binding fold family. It contains a structured beta-barrel core and unstructured N- and C-terminal extensions bearing several highly conserved amino acid residues that could be involved in RNA contacts in the protein-RNA complex. Rpp29 catalyzes the endonucleolytic cleavage of RNA, removing 5'-extranucleotides from tRNA precursor. It interacts with the Rpp25 and Pop5 subunits.
Statistics
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PSSM-Id: 514558
Aligned: 190 rows
Threshold Bit Score: 67.0673
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6AHR_D           128 AKLLKADLHGAIISVTKSKCPSYVGITGILLQETKHIFKII--Tke-dRLKVIPKLNCVFTVET--DgFIS----Y-IYG 197 human
WP_013266149       6 SNIRFRPLIGLKLKVISSTDPSLLGVSGTVVGDSKNALRLRveRgdrkKEITIIKLHSTFSITTp--dG-D----FiVRG 78  Acidilobus ...
CBRAS:TCELL_0334   6 KNILFHEIIGLRVRVLSYTDTNLNGLEGVVIDETLKTLLIE--Tae-gRRIRVFKPSGVFEFKLp--hGEV----VvIKG 76 
A3DNB5             6 RNIFYHELIGLRIKIIEYPDKSLVGLTGLVIDETQKTLLIE--Tns-gRRVRVLKANGVFQFMLp--nKEK----ViIRG 76  Staphylothe...
WP_013129721       6 SNLVYHELIGLRARVIEYPDPSVKGFEGVVVDETLKTLVLD--Ng--fRRIRVFKENGVFEFTLp--dGGS----VvIKG 75  Thermosphae...
A2BMC7             6 WNIVFHSLIGLRARVLATSDPGLRGLEGVVVEETRHSLVVE--Trd-gRRVRVLKANSIFLFQLp--gGSW----VvVRG 76  Hyperthermu...
WP_014027199       6 WNIFFHVLVGLEVCVLSHPDPAMVGRCGVVIDETARTLVLR--Dks-gKVFRVTKRDAIFEFRVgr-------vsViAEG 75  Pyrolobus f...
A8AA22             6 KNVIYHNLVGLRVEVLAHPDPSMKGLKGRIIDESKSFLTIE--Kdn-gELVKVQKL-GTFVLVLp--sGRK----VeVRG 75  Ignicoccus ...
P60832             3 QNILRHELIGLNLEVVKSTDSGLISTKGRVINETRNTLVLE--Ken-gKEITLVKEISTFRIQFesEnVVK----IdIDG 75  Methanococc...
Q9YF79            10 RQLIPPLLTGLRVKVLAHSDPSLEGLEGWVVVEEARSLRIL--Tle-gRVSTVLKDLAVIEVEA------PggeyIrISG 80  Aeropyrum p...
6AHR_D           198 SKFQLRSSERSAK 210 human
WP_013266149      79 LDIIGRPEERLKK 91  Acidilobus saccharovorans
CBRAS:TCELL_0334  77 DLILGRPAERLKR 89 
A3DNB5            77 VQILGRPEDRLKN 89  Staphylothermus marinus F1
WP_013129721      76 FEILGRPWERVKM 88  Thermosphaera aggregans
A2BMC7            77 EEIAGSLAERVKR 89  Hyperthermus butylicus DSM 5456
WP_014027199      76 ELIVGRVEERLKR 88  Pyrolobus fumarii
A8AA22            76 ELLRGRPEERLKK 88  Ignicoccus hospitalis KIN4/I
P60832            76 RLLVGRPEDRLKR 88  Methanococcus maripaludis S2
Q9YF79            81 RVLIGNPLDRVKE 93  Aeropyrum pernix K1
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