1VUB


Conserved Protein Domain Family
CcdB

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pfam01845: CcdB 
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CcdB protein
Statistics
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PSSM-Id: 426470
Aligned: 44 rows
Threshold Bit Score: 104.546
Created: 19-Apr-2021
Updated: 29-Sep-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1VUB_A                2 QFKVYTYKRES-R--YRLFVDVQSDIIDTPGRRMVIPLASARLLSdKv---SRELYPVVH-IGDESWRMMTTDMASVPVS 74  Escheric...
WP_013263162          3 QFSVYQNTNPSsKkaFPFLVDIQSNLLDDLRTTVVIPLAPLSTVD-Kp---ISRLCPILE-IDTKKYVAVTQQLAGIDRK 77  gamma pr...
WP_013263702          3 QFKAYENPNKAtKktYPYLLDIQSNLLDDLRTTVVIPLCPTSLAP-Ka--aISKLCPILE-IEGKSFIALTQQMAGIDRK 78  gamma pr...
CBJ88170              2 QYTVYKNTGNPd---YSYLLDVQSDIIDVLETRLVIPLFLKSNFH-Gr--iPTRLCPTLN-IDGNEYLVMTHAMASIRVS 74  Xenorhab...
Q7N4P3                2 QYVVYRNIGNSa---YPYLLDVQSDIIDMLNTRLMIPLFLKENFK-Gk--vPIRLCPILT-IEESDYIVMTHEMASIRVS 74  Photorha...
WP_013318624          2 QFTVYGNTGKSa--vYPLLLDVTSDIIGQLNRRIVIPLLPVEKYP-Agr-rPERFVPVVRlTDGKEYAVMTHELASIPVQ 77  Dickeya ...
Q32K46                2 QFTVYRSRSRNa--aFPFVIDVTSDIIGVINRRIVIPLTPIERFI-Rir-pPERLNPILLlVDGKEYVLMTHETATVPVN 77  Shigella...
goetting:EBL_c21160   2 QFTIYRNPGRSs--lYPLLIDVTSDIIGALNTRIVIPLLPVERYP-NpevrPVRLNPVLElIDGKQYALMTHELASIPLK 78  Shimwell...
jgi:Tola_2873         3 QFTLYRNPDEAtAttYPFFVDVQSDLLENLNTRLVIPLTPVALLE-Kk--vPSHLCPIIH-LDEGDFVILTQQTTSVPTR 78  Tolumona...
Q21DI5                3 QYDVYRNPSKQsKkhYPYLLDIQSPYISEIATRIVIPLSYAASFK-Ne--aMTNLTPEIS-FEDEQLLLLTPQISSIPVN 78  Saccharo...
1VUB_A               75 VIGEEVADLSHRENDIKNAINLMFW 99  Escherichia coli
WP_013263162         78 LLGKRVADLSEYRSDFIAALDFVIS 102 gamma proteobacterium HdN1
WP_013263702         79 SLGKEISDFSQFRSEIIAALDFIIS 103 gamma proteobacterium HdN1
CBJ88170             75 MLGDEMTNVSSHRQLIKDAMDLLFD 99  Xenorhabdus nematophila ATCC 19061
Q7N4P3               75 MIGNEVIDVTSHRKQIKDALDFLID 99  Photorhabdus laumondii subsp. laumondii
WP_013318624         78 ALGTVFCDASQYRNQIKAAIDFLID 102 Dickeya dadantii
Q32K46               78 ALGTKFCDASAHRTLIKGALDFMLD 102 Shigella dysenteriae Sd197
goetting:EBL_c21160  79 ALGAEFCDGSEYRQTVKGALDFILD 103 Shimwellia blattae DSM 4481 = NBRC 105725
jgi:Tola_2873        79 ILVEPTHDLSTFRDEIIAAIDFLIT 103 Tolumonas auensis DSM 9187
Q21DI5               79 ILSNPVGSLSHFREQIINALDFAIT 103 Saccharophagus degradans 2-40
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