6N9Y


Conserved Protein Domain Family
Orbi_NS1

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pfam01718: Orbi_NS1 
Orbivirus non-structural protein NS1, or hydrophobic tubular protein
This family consists of orbivirus non-structural protein NS1, or hydrophobic tubular protein. NS1 has no specific function in virus replication, it is however thought to play a role in transport of mature virus particles from virus inclusion bodies to the cell membrane. Orbivirus are part of the larger reoviridae which have a dsRNA genome of at least 10 segments encoding at least 10 viral proteins; orbivirus found in this family include bluetongue virus, and African horsesickness virus.
Statistics
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PSSM-Id: 396330
Aligned: 3 rows
Threshold Bit Score: 1106.29
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6N9Y_A   1 MERFLRKYNISGDYANATRTFLAISPQWTCSHLKRNCLFNGMCAKQNFERAMIAATDAEEPAKAYRLVELAKEAMYDRET 80 
P07131   1 MERFLRKYNISGDYANATRTFLAISPQWTCSHLKRNCLFNGMCVKQHFERAMIAATDAEEPAKAYKLVELAKEAMYDRET 80  Bluetongue virus (ser...
P07131   1 MERFLRKYNISGDYANATRTFLAISPQWTCSHLKRNCLFNGMCVKQHFERAMIAATDAEEPAKAYKLVELAKEAMYDRET 80  Bluetongue virus (ser...
6N9Y_A  81 VWLQCFKSFSQPYEEDIEGKMKRCGAQLLEDYRKNGMMDEAVKQSALVNSERVRLDDSLSAMPYIYVPIKEGQIVNPTFI 160
P07131  81 VWLQCFKSFSQPYEEDVEGKMKRCGAQLLEDYRKSGMMDEAVKQSALVNSERIRLDDSLSAMPYIYVPINDGQIVNPTFI 160 Bluetongue virus (ser...
P07131  81 VWLQCFKSFSQPYEEDVEGKMKRCGAQLLEDYRKSGMMDEAVKQSALVNSERIRLDDSLSAMPYIYVPINDGQIVNPTFI 160 Bluetongue virus (ser...
6N9Y_A 161 SRYRQIAYYFYSPNLADDWIDPNLFGIRGQHNQIKREIERQVNTCPYTGYKGRVLQVMFLPIQLINFLRMDDFAKHFNRY 240
P07131 161 SRYRQIAYYFYNPDAADDWIDPNLFGIRGQHNQIKREVERQINTCPYTGYRGRVFQVMFLPIQLINFLRMDDFAKHFNRY 240 Bluetongue virus (ser...
P07131 161 SRYRQIAYYFYNPDAADDWIDPNLFGIRGQHNQIKREVERQINTCPYTGYRGRVFQVMFLPIQLINFLRMDDFAKHFNRY 240 Bluetongue virus (ser...
6N9Y_A 241 ASMAIQQYLRVGYAEEVRYVQQLFGKIPTGEFPLHHMMLMRRDFPTRDRSIVEARVRRSGDENWQSWLLPMIIVREGLDH 320
P07131 241 ASMAIQQYLRVGYAEEIRYVQQLFGRVPTGEFPLHQMMLMRRDLPTRDRSIVEARVRRSGDESWQSWLLPMIIIREGLDH 320 Bluetongue virus (ser...
P07131 241 ASMAIQQYLRVGYAEEIRYVQQLFGRVPTGEFPLHQMMLMRRDLPTRDRSIVEARVRRSGDESWQSWLLPMIIIREGLDH 320 Bluetongue virus (ser...
6N9Y_A 321 QDRWEWLIDYMDRKHTCQLCYLKHSKQIPTCGVIDVRASELTGCSPFKTVKIEEHVGNNSVFETKLVRDEQIGRIGDHYY 400
P07131 321 QDRWEWFIDYMDRKHTCQLCYLKHSKQIPTCSVIDVRASELTGCSPFKMVKIEEHVGNDSVFKTKLVRDEQIGRIGDHYY 400 Bluetongue virus (ser...
P07131 321 QDRWEWFIDYMDRKHTCQLCYLKHSKQIPTCSVIDVRASELTGCSPFKMVKIEEHVGNDSVFKTKLVRDEQIGRIGDHYY 400 Bluetongue virus (ser...
6N9Y_A 401 TTNCYTGAEALITTAIHIHRWIRGCGIWNDEGWREGIFMLGRVLLRWELTKAQRSALLRLFCFVCYGYAPRADGTIPDWN 480
P07131 401 TTNCYTGAEALITTAIHIHHWIRGSGIWNDEGWQEGIFMLGRVLLRWELTKAQRSALLRLFCFVCYGYAPRADGTIPDWN 480 Bluetongue virus (ser...
P07131 401 TTNCYTGAEALITTAIHIHHWIRGSGIWNDEGWQEGIFMLGRVLLRWELTKAQRSALLRLFCFVCYGYAPRADGTIPDWN 480 Bluetongue virus (ser...
6N9Y_A 481 NLGSFLDTILKGPELSEDEDERAYATMFEMVRCIITLCYAEKVHFAGFAAPACESGEVINLAARMSQM 548
P07131 481 NLGNFLDIILKGPELSEDEDERAYATMFEMVRCIITLCYAEKVHFAGFAAPACEGGEVINLAAAMSQM 548 Bluetongue virus (serotype 10 / A...
P07131 481 NLGNFLDIILKGPELSEDEDERAYATMFEMVRCIITLCYAEKVHFAGFAAPACEGGEVINLAAAMSQM 548 Bluetongue virus (serotype 10 / A...
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