1LFP,4F3Q,1MW7,5EKZ


Conserved Protein Domain Family
Transcrip_reg

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pfam01709: Transcrip_reg (This model is not part of the current CDD release)
TACO1/YebC second and third domain
This is a family of transcriptional regulators. In mammals, it activates the transcription of mitochondrially-encoded COX1. In bacteria, it negatively regulates the quorum-sensing response regulator by binding to its promoter region. This entry represents the second and third domains in this protein, with one domain nested within the other.
Statistics
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PSSM-Id: 514445
Aligned: 624 rows
Threshold Bit Score: 70.5696
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1LFP_A         82 FEEVI-YEGYAPGGVAVXVLATTDNRNRTTSEVRHVFTKHGGNLgasGCVSYLFE-----------RKGYIEV-PAK--- 145 Aquifex aeolicus
XP_002110673   81 ATDQVlYEGRGPGNAAYLVEVLTTNRNRTRLQVKQIFTKYGGSLadpNSVIFQFS-----------RK------------ 137
XP_001376698  130 IY--LlYEGRGPGGSSLLIEVLSDSGSRCQAAIKHILNKHGGVMtd-gAK-YSFD-----------RKGVVMVgTEDkek 194
XP_004013067  134 MY--LlYEGRGPGGSSLLIEALSNSSSKCHSDIKHILNKNGGMMae-gAR-HSFD-----------KKGVIVVgEEDrek 198
69_pfamImport   1 AAQFL-YEARGPGGCLLLIEVLTDNNTRTNQEIKRILMKNGGVLs--DVGHHNFE-----------RKGVVVAeRG---- 62 
XP_003458806  135 SQ--HmFEARGPGGCLLLVEVLTDNNSRTHQEIKRLLNKNGGMLsd-gAR-HNFQ-----------RRGVVVVpGQ---- 195
33_pfamImport   1 SQ--HmFEARGPGGCLLLIEILTDNSSRSHQEIKRLLVKNGGALse-gAR-HNFN-----------RRGMVVVpGQ---- 61 
30_pfamImport   1 SQ--HmFEARGPAGYLLLIEVLSDNNTRTHQEIKRVLTKNRAMLsd-gAR-HNFN-----------RRGVVLVpGE---- 61 
XP_005994667  145 TH--LlYEGRGPGGCSLLIEVLTDNNSRSYQEVKFIMNKNGGMLcd-gAR-HCFE-----------KKGVVTVnCKNien 209
5EKZ_A        130 giyLL-YEGRGPGGSSLLIEALSNSGPKCHLDIKYILNKNGGMMae--gARHFFDkkgvvvvgvedR-------EKK--- 196 house mouse
1LFP_A        146 -EVSEEELLEKAIEVGAEDVQp----GE-EV---HIIY--TVPEELYEVKENLEKLgVpIEKAQITWKPIS-TVQInDEE 213 Aquifex aeolicus
XP_002110673  138 ------DAFELAIEIGVEDVKqvef------ndqdCIQfvCEVSRLNSCSKSLQLMqLePVSATLEYLP-QaPITLs-KS 203
XP_001376698  195 rAVNLERALELAIEAGAEDVQependDEkN-----MLRfiCDIPSLHEVRTKLDSLgLcSLSCVLEFIPNM-KVKLs-DE 267
XP_004013067  199 kPVNLERALELAIEAGAEDVKeiedeEEkN-----IFKfiCDASSLHQVRKKLDSLgLcSVSCTLEFIPNT-KVRLa-DP 271
69_pfamImport  63 -SISTERALELAIESGAEDVQetedeEAnPI---LQFI--CDTSSTKTVQTALKDLgVhTLSTGIEYISNH-TTPL-AQA 134
XP_003458806  196 -NITTERALELAIEAGAEDVQetedeEEkP-----LLQflCDVGDLNKVRASLKELgMeVLSAGLEFVART-HAPLd-ED 267
33_pfamImport  62 -DVSPERALELAIEAGAEDVKetedeEGqH-----VLQfiCDTTDVRNVRTSLEDLgMqITSSGLAFVPRT-LATLn-ED 133
30_pfamImport  62 -NVSTERALELAIEAGAEDVQdtedeEErP-----LLQfiCDMAEVRKVRASLEQLgMqITSAGLEFVPRT-LCPLd-QE 133
XP_005994667  210 qLIEPDRALELGIEVGAEDVNlmedeDNkP-----VFQfiCDVSSLREVRAKLDSMgLlTKSAGLEFIPNT-TVQLs-EA 282
5EKZ_A        197 -AVNLERALELAIEAGAEDVKea--eDE-EEknlFKFI--CDASSLHQVRKKLDSLgLcPVSCSMEFIPHS-KVQL-AEP 268 house mouse
1LFP_A        214 TAQKVIKLLNALEELDDVQQVIANF 238 Aquifex aeolicus
XP_002110673  204 KLDQASKLVEELSDHDDVIRVHDNI 228
XP_001376698  268 DMEAAAHLIEALNSYEDVIRVYDNI 292
XP_004013067  272 DLEQAAHLIQALGNHDDVIHVYDNI 296
69_pfamImport 135 QLESTAALLDTLNDCPDVVRVWDNV 159
XP_003458806  268 HLDAASILIEALNDCPDVVRVWDNI 292
33_pfamImport 134 HLVAASTLIDALGDYPDVVRIWDNI 158
30_pfamImport 134 QLDAASTLIEALNDCPDVVRVWDNI 158
XP_005994667  283 ELDMASHLIEMITGCQDVIKVNDNI 307
5EKZ_A        269 ELEQAAHLIQALNNYEDVIHVYDNI 293 house mouse
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