Conserved Protein Domain Family
Orbi_VP3

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pfam01700: Orbi_VP3 
Orbivirus VP3 (T2) protein
The orbivirus VP3 protein is part of the virus core and makes a 'subcore' shell made up of 120 copies of the 100K protein. VP3 particles can also bind RNA and are fundamental in the early stages of viral core formation. Also found in the family is structural core protein VP2 from broadhaven virus which is similar to VP3 in bluetongue virus. Orbivirus are part of the larger reoviridae which have a dsRNA genome of 10-12 linear segments; orbivirus found in this family include bluetongue virus and epizootic hemorrhagic disease virus.
Statistics
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PSSM-Id: 485154
Aligned: 2 rows
Threshold Bit Score: 1868.62
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P12435  14 TTPYLEGDVLSSDSGPLLSVFALQEIMQKVRQVQADYMTATREVDFTVPDVQKILDDIKTLAAEQVYKIVKVPSISFRHI 93  Bluetongue virus (ser...
P12435  14 TTPYLEGDVLSSDSGPLLSVFALQEIMQKVRQVQADYMTATREVDFTVPDVQKILDDIKTLAAEQVYKIVKVPSISFRHI 93  Bluetongue virus (ser...
P12435  94 VMQSRDRVLRVDTYYEEMSQVGDVITEDEPEKFYSTIIKKVRFIRGKGSFILHDIPTRDHRGMEVAEPEVLGVEFKNVLP 173 Bluetongue virus (ser...
P12435  94 VMQSRDRVLRVDTYYEEMSQVGDVITEDEPEKFYSTIIKKVRFIRGKGSFILHDIPTRDHRGMEVAEPEVLGVEFKNVLP 173 Bluetongue virus (ser...
P12435 174 VLTAEHRAMIQNALDGSIIENGNVATRDVDVFIGACSEPIYRIYNRLQGYIEAVQLQELRNSIGWLERLGQRKRITYSQE 253 Bluetongue virus (ser...
P12435 174 VLTAEHRAMIQNALDGSIIENGNVATRDVDVFIGACSEPIYRIYNRLQGYIEAVQLQELRNSIGWLERLGQRKRITYSQE 253 Bluetongue virus (ser...
P12435 254 VLTDFRRQDTIWVLALQLPVNPQVVWDVPRSSIANLIMNIATCLPTGEYIAPNPRISSITLTQRITTTGPFAILTGSTPT 333 Bluetongue virus (ser...
P12435 254 VLTDFRRQDTIWVLALQLPVNPQVVWDVPRSSIANLIMNIATCLPTGEYIAPNPRISSITLTQRITTTGPFAILTGSTPT 333 Bluetongue virus (ser...
P12435 334 AQQLNDVRKIYLALMFPGQIVLDLKIDPGERMDPAVRMVAGVVGHLLFTAGGRFTNLTQNMARQLDIALNDYLLYMYNTR 413 Bluetongue virus (ser...
P12435 334 AQQLNDVRKIYLALMFPGQIVLDLKIDPGERMDPAVRMVAGVVGHLLFTAGGRFTNLTQNMARQLDIALNDYLLYMYNTR 413 Bluetongue virus (ser...
P12435 414 VQVNYGPTGEPLDFQIGRNQYDCNVFRADFATGTGYNGWATIDVEYRDPAPYVHAQRYIRYCGIDSRELINPTTYGIGMT 493 Bluetongue virus (ser...
P12435 414 VQVNYGPTGEPLDFQIGRNQYDCNVFRADFATGTGYNGWATIDVEYRDPAPYVHAQRYIRYCGIDSRELINPTTYGIGMT 493 Bluetongue virus (ser...
P12435 494 YHCYNEMLRMLVAAGRDSEAAYFRSMLPFHMVRFARINQIINEDLHSVFSLPDDMFNALLPDLIAGAHQNADPVVLDVSW 573 Bluetongue virus (ser...
P12435 494 YHCYNEMLRMLVAAGRDSEAAYFRSMLPFHMVRFARINQIINEDLHSVFSLPDDMFNALLPDLIAGAHQNADPVVLDVSW 573 Bluetongue virus (ser...
P12435 574 ISLWFAFNRSFEPTHRNEMLEIAPLIESVYASELSVMKVDMRHLSLMQRRFPDVLIQARPSHFWKAVLNDSPEAVKAVMN 653 Bluetongue virus (ser...
P12435 574 ISLWFAFNRSFEPTHRNEMLEIAPLIESVYASELSVMKVDMRHLSLMQRRFPDVLIQARPSHFWKAVLNDSPEAVKAVMN 653 Bluetongue virus (ser...
P12435 654 LSHSHNFINIRDMMRWVLLPSLQPSLKLVLEEEAWAAANDFEDLMLTDQVYMHRDMLPEPRLDDIERFRQEGFYYTNMLE 733 Bluetongue virus (ser...
P12435 654 LSHSHNFINIRDMMRWVLLPSLQPSLKLVLEEEAWAAANDFEDLMLTDQVYMHRDMLPEPRLDDIERFRQEGFYYTNMLE 733 Bluetongue virus (ser...
P12435 734 APPEIDRVVQYTYEIARLQANMGQFRAALRRIMDDDDWVRFGGVLRTVRVKFFDARPPDDILQGLPFSYDTNEKGGLSYA 813 Bluetongue virus (ser...
P12435 734 APPEIDRVVQYTYEIARLQANMGQFRAALRRIMDDDDWVRFGGVLRTVRVKFFDARPPDDILQGLPFSYDTNEKGGLSYA 813 Bluetongue virus (ser...
P12435 814 TIKYATETTIFYLIYNVEFSNTPDSLVLINPTYTMTKVFINKRIVERVRVGQILAVLNRRFVAYKGKMRIMDITQSLKMG 893 Bluetongue virus (ser...
P12435 814 TIKYATETTIFYLIYNVEFSNTPDSLVLINPTYTMTKVFINKRIVERVRVGQILAVLNRRFVAYKGKMRIMDITQSLKMG 893 Bluetongue virus (ser...
P12435 894 TKLAAPTV 901 Bluetongue virus (serotype 10 / American isolate)
P12435 894 TKLAAPTV 901 Bluetongue virus (serotype 10 / American isolate)
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