Conserved Protein Domain Family
PLRV_ORF5

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pfam01690: PLRV_ORF5 
Potato leaf roll virus readthrough protein
This family consists mainly of the potato leaf roll virus readthrough protein. This is generated via a readthrough of open reading frame 3 a coat protein allowing transcription of open reading frame 5 to give an extended coat protein with a large c-terminal addition or read through domain. The readthrough protein is thought to play a role in the circulative aphid transmission of potato leaf roll virus. Also in the family is open reading frame 6 from beet western yellows virus and potato leaf roll virus both luteovirus and an unknown protein from cucurbit aphid-borne yellows virus a closterovirus.
Statistics
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PSSM-Id: 279954
Aligned: 2 rows
Threshold Bit Score: 748.273
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P17525 213 SEPSPSPQPTPTPTPQK-HERFIAYVGIPMLTIQARENDDQIILGSLGSQRMKYIEDENQNYTKFSSEYYSQSSMQAVPM 291 Potato leafroll virus...
P09516 219 PQPTPAPQPTPEPTPAPvPKRFFEYIGTPTGTISTRENTDSISVSKLGGQSMQYIENEKCETKVIDSFWSTNNNVSAQAA 298 Barley yellow dwarf v...
P17525 292 YYFNVPKGQWSVDISCEGYQPTSSTSDPNRGRSDGMIAYSNADSDYWNVGEADGVKISKLRNDNTYRQGHPELEINSCHF 371 Potato leafroll virus...
P09516 299 FVYPVPEGSYSVNISCEGFQSVDHIGGNEDGYWIGLIAYSNSSGDNWGVGNYKGCSFKNFLATNTWRPGHKDLKLTDCQF 378 Barley yellow dwarf v...
P17525 372 REGQLLERDATISFHVEAP-TDGRFFLVGPAIQKTAKYNYTISYGDWTDRDMELGLITVVLDehlEGTGSANRVRR---- 446 Potato leafroll virus...
P09516 379 TDGQIVERDAVMSFHVEATgKDASFYLMAPKTMKTDKYNYVVSYGGYTNKRMEFGTISVTCD---ESDVEAERITRhaet 455 Barley yellow dwarf v...
P17525 447 PPREGHTYMASPH-EPEGKPVGNKPRD-ETPIQTQ------ERQPDQTPSDDVsdagsvnsggpteslRLEFGVNSDSTY 518 Potato leafroll virus...
P09516 456 PIRSKHILVSERYaEPLPTIVNQGLCDvKTPEQEQtlvdedDRQTVSTESDIA---------------LLEYEAATAEIP 520 Barley yellow dwarf v...
P17525 519 DATVD-------------GTDWPRIPPPRHPpeprvsgnsrtvtdfsskaDLLENWDAEHFDPgyskEDVaaatiiahgs 585 Potato leafroll virus...
P09516 521 DAEEDvlpskeqlsskpmDTSGNIIPKPKEP-------------------EVLGTYQGQNIYP----EDV---------- 567 Barley yellow dwarf v...
P17525 586 iqdgrsmlekreenvknktsswkPP----SLKAVSPAIAKLRSIRKSQPLEGGTLNK-------DATDGVSSIGSGSltg 654 Potato leafroll virus...
P09516 568 -----------------------PPmarqKLREAANAPSTLLYERRTPKKSGNFLSRlveanrsPTTPTAPSVSTTS--- 621 Barley yellow dwarf v...
P17525 655 gtlkrkatieerllqTLTTEQRLWYENFKKTNP-PAATQWLFEY 697 Potato leafroll virus (STRAIN 1)
P09516 622 ---------------NMTREQLREYTRIRNSSGiTAAKAYKAQF 650 Barley yellow dwarf virus-PAV
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