Conserved Protein Domain Family
HrcA

?
pfam01628: HrcA (This model is not part of the current CDD release)
HrcA protein C terminal domain
HrcA is found to negatively regulate the transcription of heat shock genes. HrcA contains an amino terminal helix-turn-helix domain, however this corresponds to the carboxy terminal domain.
Statistics
?
PSSM-Id: 514394
Aligned: 499 rows
Threshold Bit Score: 72.579
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
WP_014760239 103 QDTLQRAARLLSHITGQVAVVA-SPSPakAkVLRVQIVPV-SStLLLIVVITGAGNVAQHTLalspqptDIT-LADVGSV 179 Bifidobacterium...
Q98R68       111 DETIELAAKSISEIVGLTMVTStENSF--EtLKSIQLVLLdKN-ESIIIIVLSSGKVISKKLamk-dsiVLDdLRIAVRI 186 Mycoplasmopsis ...
WP_011949717 109 ENTVEEAAKIITESIGVTLVTTeNNEN--AtLKNLQLVPLsDR-EGIVLITDSYNKTTTNNIninkemySMNdLAIATKV 185 Mycoplasmopsis ...
B3PN01       110 DATLEEAAAIVSEVAGVTVVATsNNAA--EtMKSIQLTTLsEL-SAIVVIVTSSGRVESKIFnfensdiSLEdLRVAIRL 186 Metamycoplasma ...
WP_012855683 120 NTTLEEAANVVSQMAGFAVVATsNNES--ElLKSIQLTPLdEE-SAVVVIVTSSGNVQNKMFkfe-sgiELNdLRIAIRL 195 Metamycoplasma ...
WP_022934917 105 NETINEAVKIISEVAGAALITRsEDIF--EkLMSISLTIInEG-SGVVVLITSSGNVENKTIifn-dfiKKEdVKIAIRL 180 Mesomycoplasma ...
CAT04849     106 EQTINEAVKIISEVAGATLIATtNDSF--EkLMSISLTIIsES-TGVVVLITSSGRVENKLInfn-nfiKKEdVKIAIRL 181
Q8EWX9       106 DVVIEESCKIISESTKLPMIKIeNNTE--VlLKRIDMVEInKQ-SAMVIVITSDGNLTKNIIhfk-ddsILKdISICIRI 181 Malacoplasma pe...
Q9PQ68       119 DEILNAAVSIINETTQLPAVVTkTSSD--ElLKRIDLVKInDN-SALVLIVTSSENILTHSIkld-kntKFNdLQTCFSV 194 Ureaplasma parv...
P75351       105 DEIIELGVKFINEMVNLPVVLThFSSD--EvLKKIDLIMLdQS-CALLLLVSASGNVFKKTIsya-nqrQFEdIMVCVRI 180 Mycoplasmoides ...
WP_014760239 180 VNGACLGLTFAQAAER---VRSLks---srRes--vALLEGLAQ-------VFeamgdnersseLYMAGASHLAHRR--- 241 Bifidobacterium...
Q98R68       187 FKERLIDTKVSELHEKtlaLKPIlkisiqnYedilqEFIINIFDfev--------------sqtNNVYGKKNIILARd-i 251 Mycoplasmopsis ...
WP_011949717 186 FNQRLVNSSLINLASSakaLWPIlsesiknYetlleEYINQVFHfaf--------------vnkNNIYGRNNIILADe-i 250 Mycoplasmopsis ...
B3PN01       187 FKERLVDTPLIHLANKaraLTPIfgqqlknYelilqKFIKNIFVfee--------------ettNKTFNKGAIVLSRn-i 251 Metamycoplasma ...
WP_012855683 196 FKERLIDTPLINLAKKtesLAPIlstqvkhFelimqKFIKNIFCfee--------------kleNKSFNKNVIILSEq-i 260 Metamycoplasma ...
WP_022934917 181 FQERLVPLPISQISEAiqiLKPVlenqikrSedilqHFLQNIFDfev--------------ksqSKVFNKNSLILNRd-i 245 Mesomycoplasma ...
CAT04849     182 FQERLISLPIIEIATAiqiLNPIlekqikhSedilkHFAENVFNfhi--------------kpdSKIYNKNSLILDRd-i 246
Q8EWX9       182 FNDRLIDCPIKEIATKidsMKSIikekvkeYefvlqELIERIFQik---skMI-----------KTVHGQSSLLAVPefq 247 Malacoplasma pe...
Q9PQ68       195 LDERLVDTKLSLISSKldlIVDIvrnkleeVeyyfsKIVHRVFDfyaykpnID-----------SKTYGVKYLTKHSefe 263 Ureaplasma parv...
P75351       181 FNDRIIDTRFCDIAQHldvLKEIirskvheYqyvidEILFKLFNfeefqqaR------------KQVYGIHYLAQQPefa 248 Mycoplasmoides ...
WP_014760239 242 DIADMAPLFDALEEQivLM-KLMsals------edtDaygvgV--AIGSEThtpelLHASVVTSgyGNspaSRtEPaesd 312 Bifidobacterium...
Q98R68       252 KREDLTKIIKLIEST--SIwQTIednle------------eeeniKIEIRP-----DNSSFLSK--KIsidNKi------ 304 Mycoplasmopsis ...
WP_011949717 251 SRQDLLKILHKIENE--SIwEIIdseisd-----------qnrniKIAICS-----DHSTFIAK--KLqnnKI------- 303 Mycoplasmopsis ...
B3PN01       252 SREEIANVLDLIEKH--SVwESIdndld------------ednniKLDVSR-----PNLSIISK--KIdfsNEkNI---- 306 Metamycoplasma ...
WP_012855683 261 SREEIAKTLELIENH--SVwEAIennld------------eekniKLDFSH-----PNLNIISK--RIqfiNHkNI---- 315 Metamycoplasma ...
WP_022934917 246 SRNKLVELLDIIEKK--SIwEILdetaes-----------edetiKISIPS-----EEASFISK--QFpksSSi------ 299 Mesomycoplasma ...
CAT04849     247 SRQKLVQLLEIIEKK--SIwEILdensqs-----------edetlKISIES-----KEASFISK--QFpksSNi------ 300
Q8EWX9       248 DTEKLKEILQILEST--SIwEQIafkqnqtgsntliT-----FgdEVSHED-------IVFAQT--DLninEQnK----- 306 Malacoplasma pe...
Q9PQ68       264 DQQKLNDLLNLLEDS--TIwQQIalnkktd------glakimLgnEIGHEH-------LAIATT--QInlaNTn------ 320 Ureaplasma parv...
P75351       249 NQERLTRILNLLEDT--SVwQQMafmnqnn------qttnitFgdKLGLEG-----EEVSVAST--LInttNEsK----- 308 Mycoplasmoides ...
WP_014760239 313 aghedgggsalggaahantaqtgmagesritddadaepgkmddgdivampsldggsggsgessgpvAFVGSIGPT-HMDY 391 Bifidobacterium...
Q98R68       305 ------------------------------------------------------------------REISVVGSK-KMDY 317 Mycoplasmopsis ...
WP_011949717 304 ------------------------------------------------------------------KEISLVGTN-RMNY 316 Mycoplasmopsis ...
B3PN01       307 ------------------------------------------------------------------KEITVIGPN-NLDY 319 Metamycoplasma ...
WP_012855683 316 ------------------------------------------------------------------KEISILGPK-NLDv 328 Metamycoplasma ...
WP_022934917 300 ------------------------------------------------------------------KEISVVGATkKMNY 313 Mesomycoplasma ...
CAT04849     301 ------------------------------------------------------------------KEISFVGSTqKINY 314
Q8EWX9       307 ------------------------------------------------------------------TKLVMVAPT-RVDY 319 Malacoplasma pe...
Q9PQ68       321 ------------------------------------------------------------------HQITVVGPT-RMDY 333 Ureaplasma parv...
P75351       309 ------------------------------------------------------------------HQLAIVGPT-RMDY 321 Mycoplasmoides ...
WP_014760239 392 AAT 394 Bifidobacterium bifidum
Q98R68       318 AKA 320 Mycoplasmopsis pulmonis UAB CTIP
WP_011949717 317 AKG 319 Mycoplasmopsis agalactiae
B3PN01       320 GEs 322 Metamycoplasma arthritidis 158L3-1
WP_012855683 329 ees 331 Metamycoplasma hominis
WP_022934917 314 SAT 316 Mesomycoplasma bovoculi
CAT04849     315 SAa 317
Q8EWX9       320 SKI 322 Malacoplasma penetrans HF-2
Q9PQ68       334 AKI 336 Ureaplasma parvum serovar 3 str. ATCC 700970
P75351       322 QKV 324 Mycoplasmoides pneumoniae M129
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap