6Y6P


Conserved Protein Domain Family
Hanta_Gn-H

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pfam01567: Hanta_Gn-H (This model is not part of the current CDD release)
Hantavirus glycoprotein Gn, head
The medium (M) genome segment of hantaviruses (family Bunyaviridae) encodes the two virion glycoproteins, Gn and Gc (also known as G1 and G2, respectively), as a polyprotein precursor. Gn and Gc forms homotetramers (spikes) at the surface of the virion which attach the virion to host cell receptors including integrin beta3/ITGB3 induce internalisation, predominantly through clathrin-dependent endocytosis. This entry represents the N-terminal two-thirds of the Gn glycoprotein ectodomain, denoted as 'head' (Gn-H) which interacts with Gc ectodomain. Release of Gn-H at acid pH induces a further conformational change of the Gc domain II tip which exposes non-polar side chains for insertion into the endosomal membrane.
Statistics
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PSSM-Id: 514355
Aligned: 3 rows
Threshold Bit Score: 203.057
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6Y6P_A          8 IECPHTVSFGENSVIGYVELPPVPLADTAQMVPESSCNMDNHQSLNTITKYTQVSWRGKADQSQSSQ---NSFETVSTEV 84   Orthohantavir...
1_pfamImport    1 LQCPHNPRQDEGFSYGWIDMPVQAYTTLQQVTVESSCPFEFHQLRKTLYSTTVVSWKKKTDTGTTTQagdSTYEGTEENG 80  
P08668         27 IECPHTVSFGENSVIGYVELPPVPLADTAQMVPESSCNMDNHQSLNTITKYTQVSWRGKADQSQSSQ---NSFETVSTEV 103  Hantaan virus...
6Y6P_A         85 DLKGTCVLKHKMVEESYRSRKSVTCYDLSCNSTYCKPTLYMIVPIHACNMMKSCLIALGPYRVQVVYERSYCMTGVLIEG 164  Orthohantavir...
1_pfamImport   81 SLLGICALDQGVSSKLITGRQGLVCQELSCNTTACLTTLHVVIPQQICSNVRSCVMTWKDHRINLNFERTFCPNGLIVSG 160 
P08668        104 DLKGTCVLKHKMVEESYRSRKSVTCYDLSCNSTYCKPTLYMIVPIHACNMMKSCLIALGPYRVQVVYERSYCMTGVLIEG 183  Hantaan virus...
6Y6P_A        165 KCFVPDQSVVSIikHGIFDIASVHIVCFFVAVKGNTYKIFEQVKKSFEStCNDTENKVQGYYICIVGGNSAPIYVPTLDD 244  Orthohantavir...
1_pfamImport  161 NCFQPLYGSSQL--PTNVETTELQVTCFFVRERTGGHKVLVDLEKIGGA-KSCTDHSFYSSYSCFLQGYSVRIKVPNLAD 237 
P08668        184 KCFVPDQSVVSIikHGIFDIASVHIVCFFVAVKGNTYKIFEQVKKSFEStCNDTENKVQGYYICIVGGNSAPIYVPTLDD 263  Hantaan virus...
6Y6P_A        245 FRSMEAFTGIFRSPHGEDHDLAGEEIASYSIVGPANAKVPhSASSDTLSLIAYSGIPSYSSLSILTSSTE--AKHVFSPG 322  Orthohantavir...
1_pfamImport  238 AISAEVISKMIMFNYGEDHDKPGHGIGSFRISAEKEFKVA-STDSEKFKGLCLSGQILYTSTYVYPKPINhyTKYILSKG 316 
P08668        264 FRSMEAFTGIFRSPHGEDHDLAGEEIASYSIVGPANAKVPhSASSDTLSLIAYSGIPSYSSLSILTSSTE--AKHVFSPG 341  Hantaan virus...
6Y6P_A        323 LFPKLNHTNCDKSAIPLIWTGMIDLPGYYE 352  Orthohantavirus hantanense
1_pfamImport  317 VLPYVNYTTCDKKVIPLVWRGLVTVPGFSE 346 
P08668        342 LFPKLNHTNCDKSAIPLIWTGMIDLPGYYE 371  Hantaan virus 76-118
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