Conserved Protein Domain Family
DEDD_Tnp_IS110

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pfam01548: DEDD_Tnp_IS110 
Transposase
Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.
Statistics
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PSSM-Id: 484981
Aligned: 82 rows
Threshold Bit Score: 106.542
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_015617670       12 VGIDIGARQNVVSAI--NFDQEFLIKmE-PVPN--TQfgaEQLESMLVKvleKNTFKTVIIGLESTSFYGVHIAN-FLSS 85  Clostridiu...
WP_014003228       11 IGLDIHQAQVTACAMltEPDGSVTIErR-QFGA--FQ---RDRRKLAQW---CASHRPDTVVMESTGIYWKSPYA-ALEK 80  Acidithiob...
WP_012268884        9 CGLDVHKKSVVACII--TPEGKEIRT-F-STMT--DD-----LIALKEF---IKAKGCSVVAMESTGSYWKPIYN-LLEL 73  Thermoanae...
WP_015255917        9 CGLDVHKKTVVACII--TPDEKEIRT-F-STMT--DD-----LLQMVDW---IKSKGCTHAAMESTGSYWKPVYN-LLET 73  Thermobaci...
Q8RAU1              9 CGLDIHKKTVVACVI--TPEEKEIRT-F-STMT--ED-----ILAMVDW---IKNKGCTHVAMESTGSYWKPIYN-ILEI 73  Caldanaero...
Q5KYC6              9 CGLDVHKKSITACVL--TPEGKEIRT-F-GTMT--DD-----LEELVEW---LKEKQVTHVAMESTGVYWKPVYH-LLEG 73  Geobacillu...
jgi:B1NLA3E_13445  18 CGMDVHKDNITACIM--TPEGKEIQT----FST--KT---VFLIQLVDW---IKQHRCTHVAMESTSVYWKPIVN-LLEA 82 
WP_014078619        7 VGIDVSKGKSTVCAM--I-HPNTIIK-E-SFEVlhTV---EEMSMLADYi--GSLDGEIRIVMESTGHYH-LPVAqFLYQ 75  Roseburia ...
WP_013657921        4 VGIDVSKSKSTVAIL--NSNGSLLVK-PyTMTH--TQ---SDMCALVDYl--CTFDEPITILMEYTGHYHYPVLK-KLQQ 72  Cellulosil...
Q5FID9              5 FGIDVSKSTSTVCEL----IGESKNE-L-TITN--DR---PGFVQLLKEl--SAFSKHPQIIFEATGVYSRRLQT-FLED 70  Lactobacil...
WP_015617670       86 SERLMPYKPYvycLNPKEVAnykDSFNSLDKNDSIDSFVIADFAR--VGRIHTEPWRGSQYLALQRLTRHRLHIVECL-T 162 Clostridiu...
WP_014003228       81 VGIQAQVVNA---RHVKHV--------PGRKTDVGDAEWLATLAR--AGLLRGSFVPPAQLRELRLIARQRQKLVGML-S 146 Acidithiob...
WP_012268884       74 ESIKILLVNA---KHIKNVP--------GRKTDVKDAEWIASLLQ--HGLLQGSFVPDREQRELRELVRYRKSLIEEK-S 139 Thermoanae...
WP_015255917       74 EEIQTLVVNA---QHIKHV--------PGRKTDVKDAEWIASLLR--LGLLRGSFIPPRDQRELRELIRYRRSLIEER-A 139 Thermobaci...
Q8RAU1             74 EGLNPMVVNA---NHIKNVP--------GRKTDVKDAEWIAGLLQ--HGLLQGSYIPSREQRELRELIRYRRSLIEER-A 139 Caldanaero...
Q5KYC6             74 ESIEVLVVNA---QHIKAVP--------GRKTDVKDAEWIADLLR--HGLLRGSYIPDRAQRELRELVRYRRSLIEER-A 139 Geobacillu...
jgi:B1NLA3E_13445  83 EDIEFLVVNA---QHMKAVP--------GRKTDVKDAEWIAKLLR--HGLLKASFIPDRNQRELRELVRYRRSIIEER-A 148
WP_014078619       76 KGFFVCVENA---YIIRQFS---RIMLHGAKTDPLDAKKLAKYGLayWSELKPYKFHPSCYTELSLLSKQYQTYIKLLiV 149 Roseburia ...
WP_013657921       73 EGFPVCIINP---YQMKKYA---DVEIHKAKTDKKDAIRIATYALekSYKLVPYNSLEQKYEDLKFLSRQYNQRISSV-S 145 Cellulosil...
Q5FID9             71 YDYDYIILNP---LKAKKKM---DLGLRYNKTDKTDAYHLALIQKlhHHPVNQIQSQ--TYKQLNSLSRFYDQLTSDL-V 141 Lactobacil...
WP_015617670      163 ---REKTYMLSnvFLKFSGF 179 Clostridium pasteurianum
WP_014003228      147 ---SEKNRLHK--VLTDGGI 161 Acidithiobacillus caldus
WP_012268884      140 ---RELNRIQK--VLEGANI 154 Thermoanaerobacter
WP_015255917      140 ---REVNRIQK--VLEGANI 154 Thermobacillus composti
Q8RAU1            140 ---REINRMQK--VLEGTNI 154 Caldanaerobacter subterraneus subsp. tengcongensis
Q5KYC6            140 ---RELNRIQK--VLEGANI 154 Geobacillus kaustophilus
jgi:B1NLA3E_13445 149 ---RQHNRIQK--VLEGANI 163
WP_014078619      150 akqNVIHLMDE--MLPGFKE 167 Roseburia hominis
WP_013657921      146 ---YTKVQLIN--LLDQTMP 160 Cellulosilyticum lentocellum
Q5FID9            142 ---TAKNRLHQ--ALQSTFP 156 Lactobacillus acidophilus
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