5U2P,4R6H,4R2B,4MFI,2THI,1O7T,1NNF,4R6Y,7DM1,6NLP,1SBP,4RXL


Conserved Protein Domain Family
SBP_bac_1

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pfam01547: SBP_bac_1 (This model is not part of the current CDD release)
Bacterial extracellular solute-binding protein
This family also includes the bacterial extracellular solute-binding protein family POTD/POTF.
Statistics
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PSSM-Id: 514344
Aligned: 141 rows
Threshold Bit Score: 35.1196
Created: 13-Feb-2025
Updated: 25-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5U2P_A  45 SGLQNVF-TK----L----ELeE-GIAVTVETIQDDQYPTVLHARLADGTAP-DVVEVSLPS------LHALDPYLYFV- 106 syphilis treponeme
P27366  57 EQIIPKFaAQwke---------ktGQEVRFNQSYGGSGSQ--TRAVIDGL-EaDVVALa--------lESDINQIEKAG- 115 Synechococcus elongat...
Q01903  58 EKIIPKFtEEwks---------ktGQDVTFEQSYGGSGSQ--TRAVVDGL-EaDIVALa--------lSSDVQKIESAG- 116 Synechocystis sp. PCC...
P0AG78  37 EQYNKAFsAHwkq---------qtGDNVVIRQSHGGSGKQ--ATSVINGI-EaDVVTLa--------lAYDVDAIAERG- 95  Escherichia coli K-12
P16700  41 AALNPPFeQQwakdNg--------GDKLTIKQSHAGSSKQ--ALAILQGL-KaDVVTYn--------qVTDVQILHDKGk 101 Escherichia coli K-12
Q97Z99  84 QGITVFVaGAylaiLnylaDQfQnATEIPVHVVGSGSFAL-ASQIASQTPVPaNVFIPv--------aYIQAVELTGSR- 153 Saccharolobus solfata...
O30142  48 KAFKRAF-------------EeK-HPNVEVQTEAAGSAAT-IRKVTELGRKA-DVIATa--------dYTLIQKMMYPE- 102 Archaeoglobus fulgidu...
Q9V2C4  47 SQLESEFaKY---------AEkElGIKVTFQDEASGSVKA-VRKVTDLGKKA-DIVAVa--------dYTLIPQLMVPN- 106 Pyrococcus abyssi GE5
Q58586  53 EEYEKMF-------------EkE-HPNVDVEREPAGSVAC-VRKIIDLGKKA-DILASa--------dYSLIPQMMMPK- 107 Methanocaldococcus ja...
1SBP_A  18 EQYNKAF-SA----H----WKqEtGDNVVIDQSHGGSGKQATS-----------VINGIEADtvtlalAYDVNAIAERG- 76  Salmonella enterica s...
5U2P_A 107 DLSKEAWIPDLLIPPTDpygktfaLPLNCAvsiNALFY-----NKDLFD-----RYGisePKSWN-ELLESCALIVKSGI 175 syphilis treponeme
P27366 116 LIQPGWQQRVPNNGIIT------------N---SVVALvtqegNPKGIK-------------DWT-DLTKPGVRIVTANP 166 Synechococcus elongat...
Q01903 117 LIQPGWEQEAPNGSIVT------------N---SVIAFvtkasDNIKVE-------------KWA-DLANPEVKVITANP 167 Synechocystis sp. PCC...
P0AG78  96 RIDKEWIKRLPDNSAPY------------T---STIVFlvrkgNPKQIH-------------DWN-DLIKPGVSVITPNP 146 Escherichia coli K-12
P16700 102 LIPADWQSRLPNNSSPF------------Y---STMGFlvrkgNPKNIH-------------DWN-DLVRSDVKLIFPNP 152 Escherichia coli K-12
Q97Z99 154 NPGWAIAFLSD------------------Q---MTIVY-----SNYTTKs-----------pYWS-QLYSNYTMAMETNN 195 Saccharolobus solfata...
O30142 103 FANWTIMFAKN------------------Q---IVLAYr----NDSRYAde--iNSQ-----NWYeILKRPDVRFGFSNP 150 Archaeoglobus fulgidu...
Q9V2C4 107 YTDFYVLFATN------------------E---IVIAFt----EKSKYAdemlkNPD-----KWYeILAREDVSFGFSDP 156 Pyrococcus abyssi GE5
Q58586 108 YADWYVMFARN------------------E---IVLAYt----DKSKYKde--iNST-----NWYkILQRPDVKIGFSNP 155 Methanocaldococcus ja...
1SBP_A  77 RIDKNWIKRLPDDS----------APYTST---IVFLV-----RKGNPK-----Q-----IHDWN-DLIKPGVSVITPNP 127 Salmonella enterica s...
5U2P_A 176 s---iVPLALSTTESFPHTLLADAITKVLGEQGARDLVKraTDDSIDW--TherALYPVLGAylelFKRGYVNKHHRTAR 250 syphilis treponeme
P27366 167 k---tSGGARWNFLGAWGSV------------------------------T---QTGGTEEQalqfTTDIYKNVPILAKD 210 Synechococcus elongat...
Q01903 168 k---tSGGARWNFLGIWGSV------------------------------T---KTGGTEEQafdfAGKVLANAPVLPKD 211 Synechocystis sp. PCC...
P0AG78 147 k---sSGGARWNYLAAWGYAL-----------------------------H---HNNNDQAKaqdfVRALYKNVEVLDSG 191 Escherichia coli K-12
P16700 153 k---tSGNARYTYLAAWGAAD-----------------------------K---ADGGDKGKteqfMTQFLKNVEVFDTG 197 Escherichia coli K-12
Q97Z99 196 t----------kYWYNFFYLLTTRFSLGIANPNTDPEGL--YAYLILQmaS---YLYANHNIsyfvHLVKANPNVKVAPS 260 Saccharolobus solfata...
O30142 151 nddpcGYRSLMAIQLAELYYNDPTIFDELVAKN--------SNLRFSE--D---NGSYVLRMpsseRIEINKSKIMIRSM 217 Archaeoglobus fulgidu...
Q9V2C4 157 nqdpcGYRSVMVMKLADLYYGKPI-----------------FETLVEKttN---IYANGTHIyapkEIIVKDKRVVIRPK 216 Pyrococcus abyssi GE5
Q58586 156 nddpcGYRTQMVLQLAELYYKDPTIYDNLVLKH--------SNIKVEE--N---NGTYLILVp--kELDVDTNKLFVRSK 220 Methanocaldococcus ja...
1SBP_A 128 k---sSGGARWNYLAAWGYALHH--------------------------------NNNDQAKaedfVKALFKNVEVLDSG 172 Salmonella enterica s...
5U2P_A 251 VREIIHDF-T-RDRIAMYFGSHl-----------vADAIIKERPGINLGACVLPITENAQD----------VltgsleVQ 307 syphilis treponeme
P27366 211 ARESTDVF-T-KGQADVLLNYEnelilaqqkgekvDYAIPPVNIN--------------------------I------QG 256 Synechococcus elongat...
Q01903 212 ARESTDVF-YkQGQGNVLLNYEnevllakqkgenqPYIIPQDFNVS-------------------------I------SG 259 Synechocystis sp. PCC...
P0AG78 192 ARGSTNTF-VeRGIGDVLIAWEneallaanelgkdKFEIVTPSESI-------------------------L------AE 239 Escherichia coli K-12
P16700 198 GRGATTTF-AeRGLGDVLISFEsevnnirkqyeaqGFEVVIPKTNI-------------------------L------AE 245 Escherichia coli K-12
Q97Z99 261 TANYVAPL-K-AGTLDFTFSYVsyavsqgleylklPPWLSFGYYPNETTWYSQFAYNISVNgqtltihgnpV------YL 332 Saccharolobus solfata...
O30142 218 EMELIHLV-E-SGELDYFFIYKsvakqhgfnfvelPVEIDLSSPDYAELYSKVKVVL-ANGkevt---gkpI------VY 285 Archaeoglobus fulgidu...
Q9V2C4 217 ETDLVGLV-E-SGSLDYFFIYKsvaeqhnlkyitlPNEINLKDFSKADFYKKVSITLGSTGktiy---akpI------VY 285 Pyrococcus abyssi GE5
Q58586 221 ETDLLAPL-E-AGAFDYLFIYKsvanqhhlkyielPKEINLGYYEYADTYKKVALKIIAKNktin---akpI------VY 289 Methanocaldococcus ja...
1SBP_A 173 ARGSTNTFvE-RGIGDVLIAWEneallatnelgkdKFEIVTPSE----SILAEPTVSVVDK------------------- 228 Salmonella enterica s...
5U2P_A 308 G-LAVHKKSARVAT----ACRALSVLASAAYQ 334 syphilis treponeme
P27366 257 P-VAVVDTYTDKHGtrkvSEAFVQFLFTPEAQ 287 Synechococcus elongatus PCC 7942 = FACHB-805
Q01903 260 P-VAVVDTTVDKKGtrevRDAFVQYLFTPEAQ 290 Synechocystis sp. PCC 6803 substr. Kazusa
P0AG78 240 PtVSVVDKVVEKKGtkevAEAYLKYLYSPEGQ 271 Escherichia coli K-12
P16700 246 FpVAWVDKNVQANGtekaAKAYLNWLYSPQAQ 277 Escherichia coli K-12
Q97Z99 333 Y-ITIPLNASNIQT----AYQFIGFVLGHESQ 359 Saccharolobus solfataricus P2
O30142 286 G-ITIPKNAENREL----AVEFVKLVISEEGQ 312 Archaeoglobus fulgidus DSM 4304
Q9V2C4 286 G-ITVLKDAPNREL----ALEFLKFLLSEKGK 312 Pyrococcus abyssi GE5
Q58586 290 G-MTVPTNAPHKKE----AIEFVKFVLGHPEV 316 Methanocaldococcus jannaschii DSM 2661
1SBP_A 229 ----VVEKKDTKAV----AEAYLKYLYSPEGQ 252 Salmonella enterica subsp. enterica serovar Typhimurium
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