Conserved Protein Domain Family
HTH_Tnp_1

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pfam01527: HTH_Tnp_1 
Transposase
Transposase proteins are necessary for efficient DNA transposition. This family consists of various E. coli insertion elements and other bacterial transposases some of which are members of the IS3 family.
Statistics
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PSSM-Id: 426308
Aligned: 22 rows
Threshold Bit Score: 60.0601
Created: 26-Apr-2021
Updated: 29-Sep-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q92W24         17 RGNRRWPDAVKARIVAES--LEPGVRVVDVARRHDVVPHQLSFWRRQAR-EGILALPFEampglsesgdaepafVPLAIA 93  Sinorhizobium ...
Q326U6         94 ERRTSYSREFKVRLAKQA--LQPGAVVARIAREHDINDNLLFKWKSQYE-DGLLSDDDIqec----------mpVPVALT 160 Shigella dysen...
jgi:Oant_4642  15 vRRRRWTTEQKLTIIEQS--FEPGETVSSTARRHGVAPNLLYRWRRLLS-EGGAAAVDSdepv-------vgnsEVKKLE 84  Ochrobactrum a...
1_pfamImport    1 ERRRRWSTAEKLAIIHET--YEADATVSIVARRHGIQPNQLFAWRKLASqGALTATAAEeevv--------pasEYRALQ 70 
O86607          2 GT-SKYSPEFRADAVALYh-ASPGGTYASVAKDLGVNHETLRTWVRD---AEQAGRPGAv--------------EATAMD 62  Streptomyces c...
CAM01937        2 AAPKKYPDELRERAVRLYreSDPKPAIRRLAEQLNVHPEALRNWIRQDE-ADRGQRQDR---------------PATDMA 65  Saccharopolysp...
Q7ARJ6          8 QTKRRFSPEFKLEAIEQV--VKYQRSTIEVARALELDPSQLRKWIRQYKeEVSGMTPDNp--------------ALTPEQ 71  Yersinia pestis
CBV30489        3 KQRRTFSAEFKREAAALV--LDQGYSHIDACRSLGVVDSALRRWVKQLQaERQGVTPKSk--------------ALTPEQ 66  Pseudomonas ae...
Q7CM17          4 NKKGKYSPEFKEQAVKRT--LSGSFTIKEVAGSLGISYFVLRQWRGEYLkKSEDQLPLTd--------------KQLKES 67  Leptospira int...
Q8EXI1          2 KGRRKYSPEFREQAVNRT--LNGSFTIKEVAESLGVSYFVLRQWKAEHLkKKETEQPLPd--------------KQLKES 65  Leptospira int...
Q92W24         94 AEPSEAVNVLA 104 Sinorhizobium meliloti
Q326U6        161 DTPEPTRPVTN 171 Shigella dysenteriae Sd197
jgi:Oant_4642  85 DRVRELERMLg 95  Ochrobactrum anthropi ATCC 49188
1_pfamImport   71 AQVKELQRLL- 80 
O86607         63 KENRQLRARVK 73  Streptomyces coelicolor
CAM01937       66 EENRRLKRENA 76  Saccharopolyspora erythraea NRRL 2338
Q7ARJ6         72 REIQSLRAQIK 82  Yersinia pestis
CBV30489       67 QKIQELEARIN 77  Pseudomonas aeruginosa PAO1
Q7CM17         68 EELKKLRKENl 78  Leptospira interrogans
Q8EXI1         66 EELKRLRKENl 76  Leptospira interrogans
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