6H8L,2C1G,1W1B,2J13


Conserved Protein Domain Family
Polysacc_deac_1

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pfam01522: Polysacc_deac_1 
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Polysaccharide deacetylase
This domain is found in polysaccharide deacetylase. This family of polysaccharide deacetylases includes NodB (nodulation protein B from Rhizobium) which is a chitooligosaccharide deacetylase. It also includes chitin deacetylase from yeast, and endoxylanases which hydrolyses glucosidic bonds in xylan.
Statistics
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PSSM-Id: 426305
Aligned: 72 rows
Threshold Bit Score: 81.1242
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6H8L_A           4 TVDPNQKVIALTFDDGPn-------------------------------PATTNQILDSLKKYKGHATFFVLGS-RVQYY 51   Bacillus sub...
Q9KDB2          39 HVATNEPVIALTFDDGP--------------------------------TALTDDILSILQEEDIKATFFLTGR-EIEEH 85   Bacillus hal...
jgi:Celf_0574  209 targTGDVSALTFDDGPn-------------------------------GATTTALLDFLAERDIRATFCVIGQ-NIQAP 256 
P73597          44 DNIRLPISLSLMFETGSqpakgaptpfgnftpppdyydmptitwyrygyTEGVPRILDLLDKYKIKITSHMSGR-TVEMY 122  Synechocysti...
O13842          63 NRPVRERSIESCFEYGS--------------------------------RCGFWRILNLFKKHKVPFTCWAIGQ-AVEKN 109  Schizosaccha...
Q97GI4          50 SVDTKDKKIAITFDSNWg-------------------------------NDNTMKILDVLDKYNAKATFFLIGR-WVEDY 97   Clostridium ...
Q9KEJ5          75 KLDTKEQVIALTLDACGgp----------------------------hgSQFDEELLAYLQEKEIPATLFVNER-WIDEN 125  Bacillus hal...
O69838          70 GGTKDGKPVALTFDADMtadqgp--------------------raasgeRFDNPGLITALRELKVPATVFMTGR-WAEEY 128  Streptomyces...
P50865          51 KGETDSKDISLTFDISWg-------------------------------DERAEPILNTLKANGIKNATFFLSAsWAERH 99   Bacillus sub...
Q9JWQ7          50 KAETDEKVAALTFNISWg-------------------------------EQRVKPIIDVLQSKKVEEATFFISAsWAERH 98   Bacillus hal...
6H8L_A          52 --PETLIRMLKEG-NEVGNHSWSHP-------LL----------TRLSVK-EALKQINDTQDIIEKI--SGY-RPTL--V 105  Bacillus sub...
Q9KDB2          86 --MEEAQKIVAAG-HEIGNHSYSHQ-------RM----------VFKSPS-FIREEIERTDEWIRQAgyEGDiH-----F 139  Bacillus hal...
jgi:Celf_0574  257 ggADVLRRIVADG-HTLCNHTTSYA-------DM----------GGWTAE-QVRADLVENLGIIRDA--LGDpDAKVpyF 315 
P73597         123 --PDRAKEIVQRG-HEAAAHGWDWD-------NE----------FNMTAP-QERDFIQRNVDIILKV--TGQ-RAVG--Y 176  Synechocysti...
O13842         110 --PVVVGAMEEAG-CEVGSHSHRWI-------NY----------EGVPPE-TEYEHIKKSVQAIQKAspSNSaPRSW--Y 166  Schizosaccha...
Q97GI4          98 --PNETKEIYRRG-NEIGNHSYKHL-------DM----------TTMSKQ-NIKKDIAMADEKIYSV--TGT-KTKV--F 151  Clostridium ...
Q9KEJ5         126 --EDVFLSLANNPlFQIENHGSAHK-------PLsvngrnawniEGTKSPeEVVNEITNNQQRIYQL--TGR-STRL--F 191  Bacillus hal...
O69838         129 --PDEARSIGRDPrFEIANHSYSHYaytddcyGL----------PTVPKE-RMRPDLERAYTAFEKA--GVPnPMPY--F 191  Streptomyces...
P50865         100 --PDTVARIVKDG-HQIGSMGYAYK-------NY----------ANLESS-EIKKDMNRAQTAFEKL--GVK-DIQL--L 153  Bacillus sub...
Q9JWQ7          99 --PELVELIQEAG-YHIGSHGYQYK-------NY----------TTWEDE-KIRKDLRQSQQVISSI--TGE-KPTL--L 152  Bacillus hal...
6H8L_A         106 RPPYGGINDEL----RSQMKMDVA 125  Bacillus subtilis subsp. subtilis str. 168
Q9KDB2         140 RPPFGKKLVVLpy-yLSQQERKTV 162  Bacillus halodurans
jgi:Celf_0574  316 RAPNGSWGVTPg--vAVAlgmqpl 337 
P73597         177 NAPGLRGSVNIlt-vLNELGFVYH 199  Synechocystis sp. PCC 6803
O13842         167 TGRASLNTRKLvcqvYKDLGLPQP 190  Schizosaccharomyces pombe 972h-
Q97GI4         152 RCPSGSYDSSTie-vAESTGHKCI 174  Clostridium acetobutylicum
Q9KEJ5         192 RSGTAFYDEVAve-iANALGVEVV 214  Bacillus halodurans
O69838         192 RFPGGCYDKTAle-eLSATGVTAV 214  Streptomyces coelicolor
P50865         154 RPPTGQFNKNVlk-vAKQYNYTVV 176  Bacillus subtilis subsp. subtilis str. 168
Q9JWQ7         153 RPPNGDFDKRVln-lAESYDYTVV 175  Bacillus halodurans
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