Conserved Protein Domain Family
HDV_ag
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pfam01517: HDV_ag 
Hepatitis delta virus delta antigen
The hepatitis delta virus (HDV) encodes a single protein, the hepatitis delta antigen (HDAg). The central region of this protein has been shown to bind RNA. Several interactions are also mediated by a coiled-coil region at the N-terminus of the protein.
Links
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Statistics
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PSSM-Id: 426302
Aligned: 2 rows
Threshold Bit Score: 167.988
Created: 19-Apr-2021
Updated: 29-Sep-2021
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
AYC81245   1 MeNKEESQKKKRGREETLQKWVDDRKRKRELEEELEKLRKRIKDRERKNPWLGNLKGML---KQDSGGGQEKKKEAAEPM 77  Avian HDV-like agent
P29996     1 M-SRPEGRKNRGGREEVLEQWVSGRKKLEELERDLRKVKKKIKKLEDEHPWLGNIKGILgkkDKDGEGAPPAKRARTDQM 79  Hepatitis delta vir...

AYC81245  78 DTGESPKKKKKKDyeglSFTPEEKQRHKRKCDLENKKKQLNAKGKQLTSQEEDELRNLQEEDkkrllkkrEERERR---- 153 Avian HDV-like agent
P29996    80 EVDSGPRKRPSRG----GFTDKERQDHRRRKALENKRKQLSAGGKNLSKEEEEELRRLTEED--------ERRERRiagp 147 Hepatitis delta vir...

AYC81245 154 -SGGVNLFGSASPSTSGGGNASSTQGL 179 Avian HDV-like agent
P29996   148 qVGGVNPLEGGTRGAPGGGFVPSMQGV 174 Hepatitis delta virus (ISOLATE D380)
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