6GLC


Conserved Protein Domain Family
IBR

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pfam01485: IBR 
Click on image for an interactive view with Cn3D
IBR domain, a half RING-finger domain
The IBR (In Between Ring fingers) domain is often found to occur between pairs of ring fingers (pfam00097). This domain has also been called the C6HC domain and DRIL (for double RING finger linked) domain. Proteins that contain two Ring fingers and an IBR domain (these proteins are also termed RBR family proteins) are thought to exist in all eukaryotic organisms. RBR family members play roles in protein quality control and can indirectly regulate transcription. Evidence suggests that RBR proteins are often parts of cullin-containing ubiquitin ligase complexes. The ubiquitin ligase Parkin is an RBR family protein whose mutations are involved in forms of familial Parkinson's disease.
Statistics
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PSSM-Id: 426285
Aligned: 159 rows
Threshold Bit Score: 30.1776
Created: 26-Apr-2021
Updated: 29-Sep-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6GLC_A        315 NRYQQYGAEECVLQMGGVL-CPRPGCG-AGL-----LPEPD---CRK--VT--CEGgnglgCGFAFCRECKEAY---HEG 377  human
Q54MZ0        178 EKYDKILVNVHLNKDKNIRyCPEIDCG-AAI-----IMPSDnnnSTT--QSveCSNq---eCKSSYCLNCREPS---HSG 243  Dictyostelium...
Q55AE0        674 TKYEEFTFSTFLMKSPNYKwCPNNNCG-NAV-----YGEID---NPR--TR--CSNk---sCNFDFCFNCEVEW---HQs 734  Dictyostelium...
Q54LZ6        472 AKYEDFLLKTTLEEDPNSRfCPRPNCN-NAM-----IGDSDt--VTM--II--CTne---sCRYTFCFNCKSEW---HKD 533  Dictyostelium...
XP_001584898  213 RKGRRTFIMS-LQHLPNFTfCLNPTCE-SGQ-----IHKSAdqpMMT------CTT-----CNFKTCFIHKLPW---HED 271  Sclerotinia s...
Q0V4X6        367 QRFDDMMARNAIGEDPNFEwCR--NCGsGQI-----HMSGVegnIFT------CAA-----CGHKMCIVHKNTW---HEG 425  Parastagonosp...
Q0UBQ8        147 NRFDELSMRSFLSADAQFRyCLSPSCNsGQV-----HNSGAegyIFR------CVA-----CGFRACTIHDAAF---HEG 207  Parastagonosp...
AAI26009      751 NLFHKKLTERTLMKDPKFLwCT--HCS-FGF-----IYERD---QLD--VK--CPQ-----CHCSFCRSCKRPWeeqHRS 810  African clawe...
Q1RL47        677 QLFQKKLRDQTLMKMPNFRwCA--HCVnGFL-----YEQQEnnlKMV------CSA-----CGKATCYDCKKPWedqHEG 738  vase tunicate
Q0UG70        177 VDFDKALVKHLLSASPTFIaCLSPMCG-KYFstdtcIPTSR---STKqqIS--CPy-----CASSLCLTCNRPW---HPR 242  Parastagonosp...
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