Conserved Protein Domain Family
Col_cuticle_N
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pfam01484: Col_cuticle_N (This model is not part of the current CDD release)
Nematode cuticle collagen N-terminal domain
The function of this domain is unknown. It is found in the N-terminal region of nematode cuticle collagens, see pfam01391. Cuticle is a tough elastic structure secreted by hypodermal cells and is primarily composed of collagen proteins.
Links
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Statistics
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PSSM-Id: 514301
Aligned: 241 rows
Threshold Bit Score: 34.3427
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
KAF8363187    14 ATASAGIAVVLFLSLISLLSVVGDVNNMRTETMDEMADFKHMAEATWKS 62 
XP_002644644  10 VASIIVSTFALVLAVFSVPMLFHKSDNVLQEISMQSDGIKAKSDMIWNE 58 
XP_001898307  12 VGTTIFSSMTIVILLFAVPAIYLKAERERSYAMTKSASFKEKSNKIWTE 60 
KAF8386120    14 VVSCSLSFLTLILLAASVPSLYYKATSERFGVDAQIELFKERTNSMWSE 62 
XP_002634240  11 RLVCLLSALTAVFTVIICLHLSSKIQNTENEIMGKQSAFKAKSQVIWAE 59 
XP_002647036   7 YTACALGAVSMLLWICLVPQISQQVSMIRDELTTEMEAWRIEVDQIYMD 55 
KAF8356658   200 gVAATLGSITLVTVLVSIPLVLREVEDIRHTLEREMHEWRVDADSTYRS 248
XP_003109087   8 YAAIVFGAISIVCIIYGVQTISYNIEDIRNEMNVEMDIWKSETDSLYRD 56 
NP_495159      8 YAAITVGLVSIGFILFAVQGISSNIEDIRNEMNIEMDAWKFETDSLYRD 56  Caenorhabditis elegans
NP_508873      9 VASIVLSTFTLVVAVFSVPMLFHKSDNVLLEISSFSDGIKAKSDLVWNE 57  Caenorhabditis elegans
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