8K32,8CY8,4XDZ,5YEQ,7TOC,1QMG,1QMG,7PCE


Conserved Protein Domain Family
KARI_C

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pfam01450: KARI_C (This model is not part of the current CDD release)
Ketol-acid reductoisomerase, C-terminal domain
Ketol-acid reductoisomerase (KARI; EC:1.1.1.86), also known as acetohydroxy acid isomeroreductase (AHIR or AHAIR), catalyzes the conversion of acetohydroxy acids into dihydroxy valerates in the second step of the biosynthetic pathway for the essential branched-chain amino acids valine, leucine, and isoleucine. KARI is present only in bacteria, fungi, and plants, but not in animals. KARIs are divided into two classes on the basis of sequence length and oligomerisation state. Class I KARIs are ~340 amino acid residues in length and include all fungal KARIs, whereas class II KARIs are ~490 residues long and include all plant KARIs. Bacterial KARIs can be either class I or class II. KARIs are composed of two types of domains, an N-terminal Rossmann fold domain and one or two C-terminal knotted domains. Two intertwinned knotted domains are required for function, and in the short-chain or class I KARIs, each polypeptide chain has one knotted domain. As a result, dimerization of two monomers forms two complete KARI active sites. In the long-chain or class II KARIs, a duplication of the knotted domain has occurred and, as a result, the protein does not require dimerization to complete its active site. The alpha-helical KARI C-terminal knotted domain can be described as a six-helix core in which helices coil like cable threads around each other, thus forming a bundle.
Statistics
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PSSM-Id: 514276
Aligned: 228 rows
Threshold Bit Score: 110.223
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
8K32_A        190 KEETETDLFGEQcVLCGGVTELIKAGFDTLVEAGYQPEIAYFECLHEL-KLIVDLIYEGGIGLMRYSVSDTAEYGDLTVG 268 Syntrophotherm...
jcvi:PRU_0551 198 EREATSDLTGERgSLMGAIQGLLLAQYEVLREHGHSPSEAFNETVEELtQSLGPLFGAKGMDWMYANCSTTAQRGALDWA 277
EPB83796      248 EKEVYSDLFGERgVLMGAIQGLFQAQYEVLRANGHSPSEAFNETVEEAtQSLYPLIGERGMDWMYSNCSTTAMRGALDWW 327
XP_036663080  251 EREVNSDLYGERgCLMGGIHGMFLAQYEVLRENGHTPSEAFNETVEEAtQSLYPLIGKYGMDYMYDACSTTARRGALDWY 330
P78827        256 KKEVISDLVGERgCLMGGINGLFLAQYQVLRERGHSPAEAFNETVEEAtQSLYPLIGKYGLDYMFAACSTTARRGAIDWT 335 Schizosaccharo...
XP_006695509  258 EKEVYSDLYGERgCLMGGIHGMFLAQYEVLRERGHSPSEAFNETVEEAtQSLYPLIGANGMDWMFEACSTTARRGAIDWT 337
XP_006956252  243 EKEVYSDLYGERgVLMGGIQGMFLAQYEVLRKNGHSPSEAFNETVEEAtQSLFPLIGKYGMDYMYNACSTTARRGALDWA 322
EEB90336       96 EKEVYSDLVGERgILMGGLMGLFNAQYNILRKNGHSPSEAFNETVEEAtQSLIPLIGERGMEYLANACSTTARRGALDWA 175
EPS97678      257 QKEVYSDLYGERgVLMGAIQGLFCAQYKVLRANGHTPSEAFNETVEEAtQSLYPLIGQHGMDYMYNACSTTARRGALDWA 336
7TOC_A        217 EREVNSDLYGERgCLMGGIHGMFLAQYEVLRENGHTPSEAFNETVEEAtQSLYPLIGKYGMDYMYDACSTTARRGALDWY 296 Candidozyma auris
8K32_A        269 PRIiNENTRAEMKKVLAAIQDGTFARELLLE-----FQV-GRPVFSALRRKG----QEHLIEKVGKELR 327 Syntrophothermus lipocali...
jcvi:PRU_0551 278 PRF-HDAIKPVMEWLYYSVQTGNEAQITIDAnskpdYRAgLEKELEAMR--------NQEMWRAGETVR 337
EPB83796      328 KPF-HDASKPVFEDLYRSVKDGSETARSLDRnsqpdYREkLEEELREIR--------ESEIWRTGKTVR 387
XP_036663080  331 PRF-KDALKPVFEDLYESVRNGTETKRSLDFnsqpdYRErLEEELQTIR--------NMEIWKVGKEVR 390
P78827        336 PRF-LEANKKVLNELYDNVENGNEAKRSLEYnsapnYRElYDKELEEIR--------NLEIWKAGEVVR 395 Schizosaccharomyces pombe...
XP_006695509  338 PRF-KDALKPVFNQLYDSVKNGDETRRALEYnsqpdYREkYEKEMEEIR--------NLEIWRAGKAVR 397
XP_006956252  323 PRF-YEANKPVFEALYESVRDGTETRRSLEFngrstYREdLQKELEIIN--------NQEVWRAGKEVR 382
EEB90336      176 PIF-ETATTPVFEKLYESVRNGTETRNALEFngrttYREdLAKEIRDIE--------EQEIWRAGQVVR 235
EPS97678      337 KVF-EETNTPLFEKLYESVKNGTETRRSLEFnsrstYRQdLAKELKEID--------DQEIWRAGKVVR 396
7TOC_A        297 PRF-KDALKPVFVELYESVKNGTETQRSLDF-----N---GAPDYRERLEEEletiRNMEIWKVGKEVR 356 Candidozyma auris
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