5K31,4AE2


Conserved Protein Domain Family
COLFI

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pfam01410: COLFI (This model is not part of the current CDD release)
Fibrillar collagen C-terminal domain
Found at C-termini of fibrillar collagens: Ephydatia muelleri procollagen EMF1 alpha, vertebrate collagens alpha(1)III, alpha(1)II, alpha(2)V etc.
Statistics
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PSSM-Id: 514245
Aligned: 19 rows
Threshold Bit Score: 357.044
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5K31_A         18 RDLEVDTTLKSLSQQIENIRSPEGSRKNPARTCRDLKMCHSDWKSGEYWIDPNQGCNLDAIKVFCNMET-GETCVYPTQP 96   human
XP_016790449 1512 glEEVLASLTSLSLELEQLRRPPGTAERPGLVCHELHRNHPHLPDGEYWIDPNQGCARDSFRVFCNFTAgGETCLYPDKK 1591
P20908       1607 GMEEIFGSLNSLKLEIEQMKRPLGTQQNPARTCKDLQLCHPDFPDGEYWVDPNQGCSRDSFKVYCNFTAgGSTCVFPDKK 1686 human
P12107       1575 GMEEIFGSLNSLKQDIEHMKFPMGTQTNPARTCKDLQLSHPDFPDGEYWIDPNQGCSGDSFKVYCNFTSgGETCIYPDKK 1654 human
5_pfamImport    1 -DAGVHATLKTLRRRLSDLRSPDGSRMDPAKTCQDLRHSHPDKKSGEYWIDPDGGSAKDAIRVFCNMEA-GETCISASPA 78  
XP_029689732 1251 HDVEVDSTLKSLNNQIETLRSPDGTQKNPARTCRDLKLCHPKWESGNYWVDPNLGCTADAMKVFCNMET-GETCVYPSIA 1329 torafugu
XP_011610544 1261 vdPGILATLKALSSQISNMKSPDGSRKHPARTCDDLKRCYPMKKSGEYWVDPNQGSVEDAIKVYCNMDT-GETCIAANPT 1339 torafugu
XP_047299208 1218 tDPGVHATLKSLSSQIETMRSPDGSKKHPARTCDDLKLCHSAKQSGEYWIDPNQGSVEDAIKVYCNMET-GETCISANPS 1296 human
XP_003975385 1588 GMEDVFGSLNNLKQDIERMKFPLGTQDNPARTCNDLHLSQPDYPDGEYWIDPNQGCTGDAIKVFCNFTAgGETCIYPDKK 1667 torafugu
XP_009292324 1463 GMEEIFGSLNSLRQEIESMRFPLGTKESPGRTCQDLHLSQPDLKDGEYWIDPNQGCARDSFKVYCNFTAgGETCLYPSKA 1542 zebrafish
5K31_A         97 SVA-QKNWYisknPKDK----RHVWFGESMTDGFQFEYggqgsdpADVAIQLTFLRLMSTEASQQITYHCKNSVAYmdq- 170  human
XP_016790449 1592 FEIvKLASW----SKEK----PGGWYSTFRRGKK-FSYvda-dgsPVNVVQLNFLKLLSATARQNFTYSCQNAAAWlde- 1660
P20908       1687 SEGaRITSW----PKEN----PGSWFSEFKRGKL-LSYvda-egnPVGVVQMTFLRLLSASAHQNVTYHCYQSVAWqda- 1755 human
P12107       1655 SEGvRISSW----PKEK----PGSWFSEFKRGKL-LSYldv-egnSINMVQMTFLKLLTASARQNFTYHCHQSAAWydv- 1723 human
5_pfamImport   79 NIP-RKSWW----TKASpsssKPVWFGSDMNAGSRFQYghgdelgNTAAVQLKLLQLLSTESHQNITFHCRNTVAYkeq- 152 
XP_029689732 1330 KIP-KKNWW----SSKSkd-rKHVWFGETMNGGFHFSYaqdgpaaAAAGVQLNFLRLLSAEASQNLTYHCKNSVAYmdq- 1402 torafugu
XP_011610544 1340 SIP-RKVWW----NSSKn---KPVWFGADINRGTHFVYgnkdqlaNTITVQMTFIRLLSKEASQTITYHCKNSVAYkdq- 1410 torafugu
XP_047299208 1297 SVP-RKTWW----ASKSpd-nKPVWYGLDMNRGSQFAYgdh-qspNTAITQMTFLRLLSKEASQNITYICKNSVGYmdd- 1368 human
XP_003975385 1668 SAGvRISNW----PKES----PGSWFSEFKRGKI-LNYvdv-edkTITLVQMTFLKLLSSAARQNFTYICHQSVAWyda- 1736 torafugu
XP_009292324 1543 VENvKMNSW----IKEK----PGSLFSQFAKGNK-FSYvds-vgeAVGVVQLGFLRLLSVQARQNLTYHCQRSVAWtdqt 1612 zebrafish
5K31_A        171 qtGNLKKALLLQGSNEIEIRAEGNSRFTYSVTVDGCTSHTGAWGKTVIEYKTTKSSRLPIIDVAPLDVGAPDQEFGFDVG 250  human
XP_016790449 1661 atGDYSHSARFLGTNGEELSFNQTTAATVSVPQDGCRLRKGQ-TKTLFEFSSSRAGFLPLWDVAATDFGQTNQKFGFELG 1739
P20908       1756 atGSYDKALRFLGSNDEEMSYD--NNPYIRALVDGCATKKGY-QKTVLEIDTPKVEQVPIVDIMFNDFGEASQKFGFEVG 1832 human
P12107       1724 ssGSYDKALRFLGSNDEEMSYD--NNPFIKTLYDGCASRKGY-EKTVIEINTPKIDQVPIVDVMINDFGDQNQKFGFEVG 1800 human
5_pfamImport  153 tsGQLKKALVLRGANGQELRAQGNARLRYTVTKDGCSKSDGLWGKTVIQYRSQTAARLPVLDLGLMDTGKAEQEFGLDIG 232 
XP_029689732 1403 stGNLKKAMLLQGSNEVEIRAEGNSRFTYSVLEDGCKKHTGRWGKTVFEYKTQKTSRLPIVDIAPMDIGGADQEFGVDVG 1482 torafugu
XP_011610544 1411 ktGNLKKAIILKGANDLELKAEGNSRFRYTVLEDSCSEANGKWGKTVFEYRTQKTPRLPIVDIAPVDIGGPDQEFGIDIG 1490 torafugu
XP_047299208 1369 qaKNLKKAVVLKGANDLDIKAEGNIRFRYIVLQDTCSKRNGNVGKTVFEYRTQNVARLPIIDLAPVDVGGTDQEFGVEIG 1448 human
XP_003975385 1737 kaDNYDKALRFLGSNDEELSYD--NNPYVKPLTDGCSLKQGY-SKTVMEINTPRIDQLPIIDVMLNDFGESNQRFGFEVG 1813 torafugu
XP_009292324 1613 tdGGYKRALRLQGANDEEISYE--TSPYIKALIDGCSYRKGL-DRTVLEVNTPQVEQLPLLDIRISDFGEDNQKFGFEVG 1689 zebrafish
5K31_A        251 PVCF 254  human
XP_016790449 1740 PVCF 1743
P20908       1833 PACF 1836 human
P12107       1801 PVCF 1804 human
5_pfamImport  233 PVCF 236 
XP_029689732 1483 AVCF 1486 torafugu
XP_011610544 1491 PVCF 1494 torafugu
XP_047299208 1449 PVCF 1452 human
XP_003975385 1814 SVCF 1817 torafugu
XP_009292324 1690 PVCF 1693 zebrafish
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