1NUK,3P1I,3NRU,4L0P,4ET7,2HLE


Conserved Protein Domain Family
Ephrin_lbd

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pfam01404: Ephrin_lbd (This model is not part of the current CDD release)
Ephrin receptor ligand binding domain
The Eph receptors, which bind to ephrins pfam00812 are a large family of receptor tyrosine kinases. This family represents the amino terminal domain which binds the ephrin ligand.
Statistics
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PSSM-Id: 514240
Aligned: 48 rows
Threshold Bit Score: 156.251
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1NUK_A           2 ETLMDSTTATAEL-GWMVhp------psG---------WEEVSGYDe-NMNTIRTYQVCNVF------ESSQNNWLRTKF 58   house mouse
20_pfamImport    1 VEILNTRNVTSDLeGWVVety-----vnG---------WDELSFPI--RNSTLRGFQICPVNnh--rkKSDTQNWLRSPF 62  
XP_002630069    31 EVLFDLSKATPAT-RWDSlal-----khDrddvwmeetWRNPAATDe-KHANQRAYVTCNYD------MDQPSNWLFSHF 97  
O61460          32 EVLFDLSKVGSDL-KWDQvsl-----rhDrddvwmeetWRNPAATDe-KHANQRAYVTCNYD------MINPSNWLFSHF 98   Caenorhabdit...
XP_015793677    36 VVLLDTTRESS-L-DWTRypygpqsktpG---------WVEESFTNfeRGINWRSYVVCDVAy------KNVNNWLWTPF 98  
EDW50916        86 VVLLDTTREAT-L-EWTRypygpqaqtpG---------WVEESFTDfvKGINWRSYVVCDVAy------HNVNNWLWSPF 148 
1_pfamImport     1 VVLLDTTTEPS-L-RWTTypygpdanaaG---------WVEESYINfeKGINWRSYVVCDVTk------QNVNNWVWTPF 63  
XP_018669018    25 VTILDTTQATSDL-GWTAsg-------tG---------WTELTNHDe-TDADLRTFQVCHIR------SPHQNNWLKTNF 80  
NP_001071692    29 VEILNTRNATSDLiGWNMtty-----vnNiedfspevkWDEVTFHQ--LNPSVRGFQICPDSqdtqsyKTNVQNWLRSPY 101  vase tunicate
XP_018673355    24 QILLDTRTALSDL-GWTKsqg---------------seWMEVTGDDe-NQNERRMLFVCQITq------PNQNNWLRTQY 80   vase tunicate
1NUK_A          59 IRRRGAHRIHVEMKFSVRDCSSipsvpgsCKETFNLYYYEADFdla-----tktFPNWMENPWVKVDTIAADE-SF---S 129  house mouse
20_pfamImport   63 MKLIGRSRIYIELNFSMRECHDled--tiCRETFKIYYAIANNgs--------rNPNLDENTFTTIDTVAAED-HFh-pR 130 
XP_002630069    98 IEVQSARRIYVELLFNIRDCLGftd-pksCKETFTVFLKQLKTshpgsakiereQFAKDMKNWQNIGRMARSN------- 169 
O61460          99 IEVKTARRIYIELLFNTRDCDAyln-pksCKETFSVYLKQFKTsrpgstkiekeRFSEDIDNWKNIGRLARSN------- 170  Caenorhabdit...
XP_015793677    99 IERHDANRIYIEIKFSMRDCNLfpgmalsCKETFSLLYHEFDSake------qdPPPWEPESYKLIDRIAADEgRF---T 169 
EDW50916       149 IDRGSANRLYIEIQFTIRDCSLfpgnalsCKETFSLLFYEFDAat-------rePPPWQTDSYRLIARIAAGEgRF---N 218 
1_pfamImport    64 IERGLANLIYIEVKFTIRDCSLfpgyalsCKETFSLLYYEFDVat-------rePPPWEPDSYKSVGRIAAGEgRF---N 133 
XP_018669018    81 INVTTTQRVYVEIKFTIRSCDGirg-vvsCKETFNLYYLESNHknd------rrSLRLNEDTYTKVDTIAADE-RF---K 149 
NP_001071692   102 MKLIGRSRLYVELNFWMRECENkd---tiCPETFKIYYAITSHqs--------eVPQLNESVFTKIDTVAAED-QFadsN 169  vase tunicate
XP_018673355    81 IRVDGARRIYVEVQFTMRSCEDvpn-vatCKETFNLYYYETDRdea-----tstFPPWGEGAYVKVDTIAADQ-RF---R 150  vase tunicate
1NUK_A         130 qvdlGGRVMKINTEVRSFG-----PVSRNGFYLAFQDYGGCMSLIAVRVFYRKC 178  house mouse
20_pfamImport  131 ----KKGGSYINTEVVTVVmpasvDISSTGIYIALMDEGACMALISLRVYSIVC 180 
XP_002630069   170 ----------SNTTTETIGfeiepDTKM--IRIAFEEQGICLSLLNVKIYYRVC 211 
O61460         171 ----------SNMTTETLGmeidsDTKT--IRIAFEEQGICLSLLNVKIYYRIC 212  Caenorhabditis elegans
XP_015793677   170 ----SNSETIINTEVRSI------PVSKKGVYFAFRDQGACLSLMAIKIFYVAC 213 
EDW50916       219 ----QNSDVDINTEVKSI------AVNKKGVYFAFRDQGACISVLAVKVYYITC 262 
1_pfamImport   134 ----ANNEVVINTETKAV------KVTKKGVYFAFRDQGACISIMAVKVYYIVC 177 
XP_018669018   150 ----PDTRVEANTETRMIS-----PIRSRGLYIAFQDTGACMSIMHVRVYYKSC 194 
NP_001071692   170 ----SDWTEVLNTEIVNIEipqsiDISHAGVYVAIVDKGACIALVSVRVYSIVC 219  vase tunicate
XP_018673355   151 ----PGSDKVVNFERRNIG-----PISKNGIYLAIQDTGACVAIMHVKVYYKYC 195  vase tunicate
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