5T1G,3P7J,1E0B,6FTO


Conserved Protein Domain Family
Chromo_shadow

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pfam01393: Chromo_shadow (This model is not part of the current CDD release)
Chromo shadow domain
This domain is distantly related to pfam00385. This domain is always found in association with a chromo domain.
Statistics
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PSSM-Id: 514229
Aligned: 77 rows
Threshold Bit Score: 44.8478
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5T1G_A         13 PERIIGATDS-----SG--------ELMFLMKWKNSDEADlVPAKEANVKCPQVVISFYEERLTW 64  human
XP_002172829  269 WEDMVERVEAi---eRLqn-----gKLIVRLKWTNGHSSL-HDNVVVYGKCPMKVLSYYEQHSSF 324
O42934        324 WEDLVDCVKTv---qQLdn-----gKLIAKIKWKNGYVST-HDNIIIHQKCPLKIIEYYEAHIKF 379 Schizosaccharomyces pombe 972h-
XP_013022389  295 WEDLVDRVETv---qKLkn-----gKILVKLHWKNGQQST-HDNVVVHQKCPLHIIRFYEDHLSF 350
XP_007296014  205 WEDAVIAIDAc---eGNds------nVVVYLTWKGGHKTQ-HPLAQVYKRCPQKMLAFYESHLVF 259
12_pfamImport   1 WEEDVIAIDAc---eGAkg------dVLVYLTWKGQHKTQ-HPLSQVYKRCPQRMLKFYESHLVF 55 
9_pfamImport    1 WEHDVSHIDTv---eEKadpktgelGRFAYIVWLNQQKTL-HPLKHVYQKCPQKMLEYYESHLVF 61 
Q0U549        146 WEDDVDYIDTv---eEKvdprtgelSKFAYLVWKNDKKTQ-HPLKHIYQKCPQKMLLYYESHLVF 206 Parastagonospora nodorum SN15
XP_003712460  180 WEDQIDTVDMt---rNDk------gELIVWLGWKNGEKSQ-HKAQQAYTRAPQKMLKFYESKINF 234
6FTO_A         10 WEDLVDCVKTvqqldNG--------KLIAKIKWKNGYVSt-HDNIIIHQKCPLKIIEYYEAHIKF 65  fission yeast
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