3FIK


Conserved Protein Domain Family
Ribosomal_L25p

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pfam01386: Ribosomal_L25p (This model is not part of the current CDD release)
Ribosomal L25p family
Ribosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis, which is induced by stress.
Statistics
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PSSM-Id: 514223
Aligned: 545 rows
Threshold Bit Score: 42.0456
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3FIK_V         4 INAEVRkeQ-GKGASRRLRAANKFPAIIYGGkEAPLAIELDHDKVMNMQAKaefySEVLTIVVDgkeikVKAQDVQRHPY 82  Escherichia coli
P56078         2 LEGVIRe-SiTKANAKALKKDGYLIANVYGKgIENVNGAFKLNPFIKYLKEk--kHLIFPVKLGdktfeVVVQEYQKNPV 78  Helicobacter py...
WP_006655767   2 lSGIIRe-SiSKADTKALRKNGYLIANIYGKgRENIHCAFKRNDFIREVKNk--tDLIFEVEVGtqkypVVIQEYQKDPI 78  Helicobacter ca...
Q7M7U7         2 LEGIIRe-SiSKSAVKALRNDGYLIANIYGKgQENTHCAFKKNDFIRAVKSk--tNIIFPVKVGgkeinVVVQEYQKDPI 78  Wolinella succi...
WP_015453296   2 LEGQIRe-SiSKSQAKALRNDGYLIANIYGKgQENIHCAFKLNDFIKAVKHk--sTLIFPVKVDgktldVVVQEYQKDPV 78  Helicobacter ci...
WP_013023139   2 LEGKVRe-SiSKAEVKALRNDGYLIANIYGKgVENIHCAFKLNDFIRTIKSk--tHLVFPVSVGgkmldVVVQEYQKDPV 78  Helicobacter mu...
Q9PII8         2 LEGIVRe-SiGRKAAKALKRDGYLIANIYGKgLENINAAFKVNEFIKEVRKk--tTLIFDVKVGsqtlsVVVVDYQKDPV 78  Campylobacter j...
A7I2W4         2 LEGIVRe-SiGRKSSKALRRDGYLIANIYAKgFKNINAAFKVNDFIKVVKAk--tTLPFEVKIAdktykVVVQDYQKHPV 78  Campylobacter h...
A6Q1Y9         2 LEGIVRe-StGKKATKALRRDGYLIANIYGKdFPNIHAAFKKGDFIRTVRHk--eKLAFPVKVGdkeleVVVQEYQKDPV 78  Nitratiruptor s...
Q30TD5         2 LEGIIRe-SiGKKGTKALRRDGYLIANIYGKgLQNLHAAFKENEYIRTVRNk--eTLSFPIKVDskemnVVVQAYEAHPV 78  Sulfurimonas de...
3FIK_V        83 KPKLQHIDF 91  Escherichia coli
P56078        79 TNELIHVDL 87  Helicobacter pylori 26695
WP_006655767  79 TSEITHVDL 87  Helicobacter canadensis
Q7M7U7        79 TSDLLHVDL 87  Wolinella succinogenes DSM 1740
WP_015453296  79 TNTIIHVDL 87  Helicobacter cinaedi
WP_013023139  79 TSNILHVDL 87  Helicobacter mustelae
Q9PII8        79 TAELKHVDL 87  Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819
A7I2W4        79 TNALKHVDL 87  Campylobacter hominis ATCC BAA-381
A6Q1Y9        79 TYDLLHVDL 87  Nitratiruptor sp. SB155-2
Q30TD5        79 TGKLLHVDL 87  Sulfurimonas denitrificans DSM 1251
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