1B33


Conserved Protein Domain Family
CpcD

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pfam01383: CpcD 
Click on image for an interactive view with Cn3D
CpcD/allophycocyanin linker domain
Statistics
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PSSM-Id: 426232
Aligned: 107 rows
Threshold Bit Score: 54.4471
Created: 26-Apr-2021
Updated: 29-Sep-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1B33_N              1 GRLFKITACVPSQ-TRIRTQR-ELQNTYFTKLVPYENWFREQQRIQKMGGKIVKVEL 55  Mastigocladus laminosus
jgi:Syn7502_03297 234 GKVYRIEVTSMYG-QG---YP-KTRRSSTAYLVPFDDLLPKMQQIHRQGGKIASITa 285 Synechococcus sp. PCC 7502
WP_009767928      237 GRIYRMEVAAIRS-PG---YP-SVRRSSVAYLVPYEQLSAKMQQVQRTGGRIVSITP 288 Oscillatoriales cyanobacterium C4...
P50034            235 GRVYRIEVAGIRQ-PG---YP-GVRRSSTAFLVPYEQLSAKMQQLQRTGARIISVNP 286 Thermosynechococcus elongatus BP-1
WP_013192118      234 DRVYRIEVAGIRN-PG---YP-KVRRSSTVFIVPYERLLDKMQQIHRQGGKIVSVis 285 Trichormus azollae
jgi:Riv7116_3563  279 dRSYRIEVTGQLF-PK---YP-KVRRSSYAIVVPYERLSDKMQQILRQGGKIVSVTP 330 Rivularia sp. PCC 7116
Q2JMW2             17 SRVYRVEYTGLLNpPDALATSaKVRRSTLSTTVPYSRLSAEMQRILRMGGKIVQVTA 73  Synechococcus sp. JA-2-3B'a(2-13)
jgi:Cal7507_3701  234 dRTYRIEVTAIRS-PG---YP-SVRRSSTVFIVPYERLSDKIQQIHKLGGKIVSVTS 285 Calothrix sp. PCC 7507
WP_015113942      234 DRVYRIEVTGLRS-PG---YP-SIRRSSTAFIVPYERLSDKIQQIHKQGGKIASVTP 285 Nostoc sp. PCC 7107
WP_015190908      240 GRMYRIEVTGILQ-PG---YP-KVRRSSTAFLVPYERLSQKYQEITKKGGRIVSVTP 291 Gloeocapsa sp. PCC 7428
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