5M6R


Conserved Protein Domain Family
Porphobil_deam

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pfam01379: Porphobil_deam (This model is not part of the current CDD release)
Porphobilinogen deaminase, dipyromethane cofactor binding domain
Statistics
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PSSM-Id: 514217
Aligned: 588 rows
Threshold Bit Score: 95.5185
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5M6R_A           49 IRVGTRKSQLARIQTDSVVATLKAsypgL--QF--EIIAMSTTGDKILdtalSKIgeK-SLFTKELEHALEKNEVDLVVH 123 human
WP_015662469      8 LVIGTRDSDLAMVQAAHVADLLKR----AfpQVtvDLAPMKAAGDLHQgp-lSQIggK-AVWVRELDRALATARVDVTVS 81  Streptomyces...
WP_014135456     11 LRIGTRSSPLALAQTDMVVAALRE----HvpDLvaETVPVTTEADLWQgd-lAQLggK-GLYTKQIDAMLQAGAVDMAVH 84  Kitasatospora
EST19712          7 IRIVSRDSPMALAQVERVRAELavlh--pgvrT--EVVPVKTTGDKWLgd-lAKVegK-GAFTKEVDAALLAGKADLAVH 80 
jgi:FsymDg_2162   9 IRIGTRSSPMALAQAERVRAELtaln--pdltA--EIVPITTSGDRWTgp-lSTLggK-GAFTKEVDEALLAGRADLAVH 82 
WP_014440678      7 LRIGTRSSPMALAQVERVRLMLaerh--pdvtV--EVLPLSTSGDRWQgs-lADLggK-GAFTKEVDQALLDGRVDLAVH 80  Actinoplanes...
WP_013015994      5 VRIGTRSSPMALAQADRVSAALtald--pdvaV--EIVPFTTSGDKWMgp-lSQLggK-GAFTKEVDAALVEGTCDLCVH 78  Stackebrandt...
WP_013912897      1 MRIGTRKSVMALAQTSEIARQLTA----AdpALdvEIVKFETTGDQDQtgklLDLggKgGAFVAQIRDAVREGRLEAAMH 76  Afipia carbo...
Q6N9N5            6 VRIGTRKSVMALAQTEDIAKQLSA----AasELdpQIIKFETVGDSDQisklLPHggKgGAFVAEIRAAMLRGELHCAMH 81  Rhodopseudom...
WP_011924973      4 FRIGTRKSTMALAQTEEIARRLQA----AipSLdiEIVKFETTGDSDQtsklLTHggKgGAFVAEIRRAMLDGKLHAAMH 79  Bradyrhizobi...
5M6R_A          124 SLKDLPTVL--P-P-GF--TIGAICKRENPHDAVVf---HP---KfvGKtlet----lpekSVVGTSSLRRAAQLQRKFP 187 human
WP_015662469     82 CAKDLPG----PhErGTdtTIGAVLPREDARDALV----LPagrP--PTtldd----lppvSVIGTSAPRRIAQLRASYP 147 Streptomyces...
WP_014135456     85 CVKDVPGDV--PlPrGL--VFAAYMERPDVRDVLLfpegSG------YRtlad----lppgAVILSSAVRRKAQILRARP 150 Kitasatospora
EST19712         81 CVKDVPADRplP-A-GT--VFAAFLKRDDIRDALVh--pDG------LTldel-----pagTRIGTSSVRRVAQLAATHP 143
jgi:FsymDg_2162  83 CMKDVPGDRpvP-A-GT--VFAAYLPRDDIRDALIh--pGG------RTldql-----pagTRVGTSAVRRIAQLAQSHP 145
WP_014440678     81 CVKDVPGDRpaP-A-GT--VLAAYLARDDVRDCLIh--pGG------RRidql-----pagSRVGTSAVRRIAQLALHYP 143 Actinoplanes...
WP_013015994     79 CVKDIPGDRdlP-E-GT--VIAAHLERDDVRDALVh--pGG------LSlsdl-----pdgSRIGTSSPRRAAQLALHWP 141 Stackebrandt...
WP_013912897     77 SLKDMPGNEdtP---GL--VIGATLTRDPPTDALV----VR---H--GVtladlrrtggkgFKIGTNAVRRAAYVRRLFP 142 Afipia carbo...
Q6N9N5           82 SLKDMPANEetP---GL--IVAATLARDPACDSLV----LR---K--GLtleelkksrgkgYTIGTNAVRRAAYAKRLFP 147 Rhodopseudom...
WP_011924973     80 SLKDMPGNEetP---GL--VIAALLSRDPPGDVLV----LR---K--GLaledfrkdggrgFKIGTNAVRRAAYARRLFP 145 Bradyrhizobi...
5M6R_A          188 HLEFRSIRGNLNTRLRKLDEqQ------------EfSAIILATAGLQRMGwhn-rvGQ---I--L--HPeeCM-YAVGQG 246 human
WP_015662469    148 RLTIQPVRGNLLPRLARLDA-Geg--------dkPlDALVVSYAGLCRV-------SKadrAtqLipTS--VLaPATGAG 209 Streptomyces...
WP_014135456    151 DLEVVRVRGAVGSRLEKLDG-Akqi-------dvHaDGMVLAAAGLARLG-------IerpGyvL--SMdeML-PAVGAG 212 Kitasatospora
EST19712        144 HLDCVPFRGNANRRLQKLAe-------------gEaDALLLAVAGLERIGrtdvisEV------L--STetMM-PPIGAG 201
jgi:FsymDg_2162 146 HLETVPIRGNANTRLARLDd-------------gAaDALLLAVSGLERIGqagritEI------L--SAetMC-PPIGAG 203
WP_014440678    144 HLTAVPIRGNANSRLAKLDa-------------gDyDALLLAVSGLHRIGqeqrmtHP------I--DVdtFV-PAVGSG 201 Actinoplanes...
WP_013015994    142 RLSPLPIRGNANTRLAKLDa-------------gDfDALLLAVSGLERLAltdritEI------L--DVdtMV-PAIGSG 199 Stackebrandt...
WP_013912897    143 ECEIIHFRGAADTRIRKLDN-GekqrlpeggevgPaDALVMAQAGLERVG------CAdriAhcF--SPdeIL-PAVGQG 212 Afipia carbo...
Q6N9N5          148 EVEVIHFRGAADSRMRKLDN-RekqrmpdgsevgPaDALIMARAGIERVG------FVdriAhdF--TPeeML-PAAGQG 217 Rhodopseudom...
WP_011924973    146 HAELIHFRGAADTRIRKLDN-GelqrmpdggavgPaDALIMARSGLERVG------LSdraSheF--PVadML-PAVGQG 215 Bradyrhizobi...
5M6R_A          247 ALGVEVRAKDQD 258 human
WP_015662469    210 TLVVEHRSGDSV 221 Streptomyces davaonensis
WP_014135456    213 VLGLECRQGDPA 224 Kitasatospora
EST19712        202 ILALQCREDDTE 213
jgi:FsymDg_2162 204 VLGLQCREDDTd 215
WP_014440678    202 TLVLQCRDDDTV 213 Actinoplanes missouriensis
WP_013015994    200 TLALQCRTDDTP 211 Stackebrandtia nassauensis
WP_013912897    213 IVAVECAASDwc 224 Afipia carboxidovorans
Q6N9N5          218 IVAVECPVHEWK 229 Rhodopseudomonas palustris
WP_011924973    216 IVAVECPASDFE 227 Bradyrhizobium sp. ORS 278
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