8J70,1UFN,1OQJ


Conserved Protein Domain Family
SAND

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pfam01342: SAND (This model is not part of the current CDD release)
SAND domain
The DNA binding activity of two proteins has been mapped to the SAND domain. The conserved KDWK motif is necessary for DNA binding, and it appears to be important for dimerization. This region is also found in the putative transcription factor RegA from the multicellular green alga Volvox cateri. This region of RegA is known as the VARL domain.
Statistics
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PSSM-Id: 514192
Aligned: 55 rows
Threshold Bit Score: 91.0954
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
8J70_A        10 DFKAPLLPVTCGGVKGILHKKKLQQ-GILVKCIQ---TEDg-KWFTPTEFEIKGGHARSKNWRLSVRCGGWPLRWLMENG 84  human
Q18624        70 PLNATTVPVTCGYVKGIMHLKLFRCpGIRQACIE---YES--QYLTPKQFTELGGKGRQKDWKACIRVENVSLRTLLENK 144 Caenorhabditis ...
XP_002641996  91 GDASPTVPVSCGNVNGKMHLNMFMCpGIHQPCIE---VGN--DLLSPKQFTVRGDKERQKDWKASIRIGRSSLRTHMEAL 165
XP_020304090  16 DLKAPILEVRCGHLVARLHTEKFVCpGIHQPCIE---LDG--ELISPKEFTIRANKDKQKDWKGSIRIGKSNMRALMEMK 90 
3_pfamImport   1 QSMPKLVEITCGALSGILHMEHFICpGIREKCISshdNPG--ELMTPVEFTIKADKIRQKDWKGAIKHQGRMLRTLMEFK 78 
NP_001317728  76 VSLPPVITVKCGTLTAKMVTKLFTCpGIHQNCIL---IDGetEYISPKEFTVRANKDKQKDWKGSIRIGKSNLRTLMEMR 152 Caenorhabditis ...
XP_029700798  66 DDVEIGCPITCGDCKALLLMKKFVCpGINVKCVK---YED--QLISPKQFVHISGKATLKDWKRAIRMGGVMLRKMMDSG 140 torafugu
XP_011620125 101 vQADVFYPITCGDAKATLIWKKFVCpGINVKCVQ---FNE--QLISPKEFVCLAGKSTLKDWKRAIRLNSTMLRKIMDSG 175 torafugu
XP_011527081   8 LEAEIVYPITCGDSRANLIWRKFVCpGINVKCVQ---YDE--HVISPKEFVHLAGKSTLKDWKRAIRMNGIMLRKIMDSG 82  human
XP_026693244 181 PKEDSTYPITCGNNKGDLVWKKFVCpGINAKCVK---CGD--NWFTPKEFVNYAGKSTLKDWKRAIRINGIMLRKMIENG 255 vase tunicate
8J70_A        85 FL 86  human
Q18624       145 TI 146 Caenorhabditis elegans
XP_002641996 166 TI 167
XP_020304090  91 SL 92 
3_pfamImport  79 QL 80 
NP_001317728 153 SL 154 Caenorhabditis elegans
XP_029700798 141 QL 142 torafugu
XP_011620125 176 EL 177 torafugu
XP_011527081  83 EL 84  human
XP_026693244 256 EL 257 vase tunicate
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