Conserved Protein Domain Family
Chlam_OMP

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pfam01308: Chlam_OMP 
Chlamydia major outer membrane protein
The major outer membrane protein of Chlamydia contains four symmetrically spaced variable domains (VDs I to IV). This protein is believed to be an integral part to the pathogenesis, possibly adhesion. Along with the lipopolysaccharide, the major out membrane protein (MOMP) makes up the surface of the elementary body cell. The MOMP is the protein used to determine the different serotypes.
Statistics
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PSSM-Id: 279628
Aligned: 2 rows
Threshold Bit Score: 753.432
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q46409         1 MKKLLKSVLvFAALSSASSLQALPVGNPAEPSLMIDGILWEGFGGDPCDPCATWCDAISMRVGYYGDFVFDRVLKTDVNK 80  Chlamydia trach...
WP_038501092   1 MKKLLKSAL-LVAVGSTASLQALPVGNPAEPSLLIDGTMWEGTSGDPCDPCATWCDAISVRAGFYGDYVFDRVLKIDTTK 79  Chlamydia avium
Q46409        81 EF-QMGAKPTTdTGNSAAPS---TLTARENPAYGRHMQDAEMFTNAACMALNIWDRFDVFCTLGATSGYLKGNSASFNLV 156 Chlamydia trach...
WP_038501092  80 TVdDMAAAPTA-TGQDSAPTttnTAATRNNAAYGKHIHDAEWATNSAYLALNIWDRFDVFCTLGAANGYFKAGSDAFSVV 158 Chlamydia avium
Q46409       157 GLFGdnENQKTVKAESVPNMSFDQSVVELYTDTTFAWSVGARAALWECGCATLGASFQYAQSKPKVEELNVLCNAAEFTI 236 Chlamydia trach...
WP_038501092 159 GLFG--LSAASVAAADLPNVFLTQGVVELYTDTAFSWSIGARGALWECGCATLGAEFQYAQSKPKVETLNVFCTPAQFTV 236 Chlamydia avium
Q46409       237 NKPKGYVGKEFPLDLTAGTDAATGTKDASIDYHEWQASLALSYRLNMFTPYIGVKWSRASFDADTIRIAQPKSATAIFDT 316 Chlamydia trach...
WP_038501092 237 HKPRGYKNTTFPLPADAGTDAATDTKSATIQYHEWQAGVALSYRLNMLVPYFGVKWSRASFDADNIRIAQPKLASAILDL 316 Chlamydia avium
Q46409       317 TTLNPTIAGAGdVKTGAEGQLGDTMQIVSLQLNKMKSRKSCGIAVGTTIVDADKYAVTVETRLIDERAAHVNAQFRF 393 Chlamydia trachoma...
WP_038501092 317 TAWNPTFMGTA-ASTEVNEKLNDFIQIASMQINKMKSRKACGIVVGATLVDADKWSITGEARLIDERAAHVNAQFRF 392 Chlamydia avium
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