5ZX8,3NEA,3TCN


Conserved Protein Domain Family
Pept_tRNA_hydro

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pfam01195: Pept_tRNA_hydro 
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Peptidyl-tRNA hydrolase
Statistics
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PSSM-Id: 426115
Aligned: 838 rows
Threshold Bit Score: 74.7761
Created: 26-Apr-2021
Updated: 29-Sep-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5ZX8_A           7 LVVGQGNP---GERYARTRHNLGFMVLDRL-GLSFRP-----------------------------RGEALVA------- 46  Thermus therm...
jgi:Desti_3057  11 VIVGLGNP---GRAYARHRHNVGFMVVDELaRISNSSwkkdrvd----------------aeickaLIEGHSI------- 64  Desulfomonile...
EXX70965         8 VVVGLGNP---EPEYATTRHNAGYIFIDYLaNAISLAqgqaardlpkfyrrldlsadvrdtlftstNEDGSITn------ 78  Rhizophagus i...
XP_001616141     7 VLIALGNElkrGAASHQCKGDVARMYVNYLrQRYSMDewnhv-------------------snvnsFICEKNN------- 60  malaria paras...
XP_003293397     2 ILVGLGNP---GDKYLDTRHNVGFKVVDRIcELFEQE-----------------------------KSQKKDNiik--ps 47  Dictyostelium...
Q8EZN2           3 LIVGLGNP---GDRYNNNRSNIGFKILDVIaNNINVEi----------------------------KTKKKKSligr-gd 50  Leptospira in...
jgi:Turpa_2709   8 LVIGLGNP---GDRYMNNRKNIGFKVVDVLaNNTGIQi----------------------------KTKKKKSllgq-gd 55  Turneriella p...
Q6MJR3           3 LIVGLGNP---GGEYKLTRHNIGFMAVDFLmEGLGNPpik-----------------------nqfKAEIAQAk------ 50  Bdellovibrio ...
Q04H98           4 IVVGLGNI---GAKYAHNRHNVGFMAVDELaARLQANf---------------------------sLKQNLHAfvasthi 53  Oenococcus oe...
EHN58447         4 VIVGLGNI---GAKYAHNRHNVGFMAVDELaQRLNTTf---------------------------sLKQNLHAfiatavv 53  Oenococcus ki...
5ZX8_A          47 -EAEGGLFLKP-LTYYNLTGRAVAPLARFYKIPpE---RILVVHDEMDLPLGRIRFKAGGS--AA--GNRGVLSIEEALG 117 Thermus therm...
jgi:Desti_3057  65 ------TLIKP-QTYMNLSGKAVAPIMNRLY---AdpsRLMVIHDDMDIAFGRVRIKLGGG--DG--GHKGVRSIMDSLR 130 Desulfomonile...
EXX70965        79 -SFRI-ILIKP-LTAMNESGYAVQKVLQHFGVn-Dt-kKLIVAADDLNTLPGTLMI-QSGGdlSAmkGHKGLENIVSVIG 152 Rhizophagus i...
XP_001616141    61 -----IILIKPvTSLEKNSGLAIKNILNYLNCe-Dl-kNVCIILPDLYRSIGKFKYK-------------SYTKIYEKLG 120 malaria paras...
XP_003293397    48 kIIKQVILLKP-QNFMNRSGASIRNISTEFDVPtE---NILVFHDEITQDTGNIIMKANGG--AS--NHNGVKDIIDRLK 119 Dictyostelium...
Q8EZN2          51 fEGEEVVLLKP-QTFSDLSGESVLYIASFLKIQvG---EILVIQEDWTLPLGRIVVDKGTQ--ET--DHPGVKSIVQSLR 122 Leptospira in...
jgi:Turpa_2709  56 fEGHDIVLLKP-QTFMDLSGEAVLYIASFLRVQvA---NIIVVHDDITLKYGEVVVAQGPP--EI--PNIGVESIARGLK 127 Turneriella p...
Q6MJR3          51 iKDHPVIFCKP-QTYMNLSGESVQPLMGFYKIPlE---RLIVIHDEIDQPFAQMKIQKNRG--HG--GHNGIKSISGLMG 122 Bdellovibrio ...
Q04H98          54 eEEKV-YLVKP-TTMMNDSGIAVKAVLNYFGg--Dv-nDLIVFVDDIDRDYGQLRIKKSGA--SG--GHNGLKSIVSQIA 124 Oenococcus oe...
EHN58447        54 aSEKV-YLVKP-TTMMNDSGLAVEAVMHYFDa--Gl-dDLIVFVDDIDRDYGQLRIKKSGA--SG--GHNGLKSIESAIG 124 Oenococcus ki...
5ZX8_A         118 TRAFHRLRLGIGKPPd--------PsR-GAE-YVL-SPFR-EE----E-LP----VVERV--LEA----AKEA-VWCWVR 169 Thermus therm...
jgi:Desti_3057 131 FSNFIRVRLGVGRPPvgv---ppeT-------FVL-SAFDpQD----EtAA--------AhlVSG----GCRA-VQFVVa 182 Desulfomonile...
EXX70965       153 TE-FIRFRLGIGRPIs--------KtTeISQ-WVL-TPFE-KG----NrEMdlfgHL-----LHL----TTQAlYDYSIH 207 Rhizophagus i...
XP_001616141   121 PDFYNILn------------------SnIIN-NVLcNHFL-------Q--------L--CigVSNypneTKNA-VAIALQ 163 malaria paras...
XP_003293397   120 TQKFSRFKLGVGp-----------KnNePTHlFVL-RRVS-NE----NqPK-----LDSS--IE------KAA-LYSIMW 168 Dictyostelium...
Q8EZN2         123 SPNFIRIRIGiqnd------gfnlKnRe---sFLK-EDFE-PM----EnLS-----LIQI--IND----AEAA-IRSISL 175 Leptospira in...
jgi:Turpa_2709 128 SDKFVRIRMGVGpvkirgkefpnpKeNe-IKaFML-SDFT-LE----EnMK-----IIEV--IND----AEAA-LRSILT 188 Turneriella p...
Q6MJR3         123 SMDYTRLRLGVGRPAn-------pNiP-VPD-YVL-GKFT-KE----E-FA----QMPDF--LNK----AGDA-VESIIL 175 Bdellovibrio ...
Q04H98         125 SQEFLRIRIGTGRPAh--------NpQaVIK-HVL-GDFSpLQlelvQ---------PE---IDN----GVSA-ALDIIN 177 Oenococcus oe...
EHN58447       125 SQKFVRIRIGTGRPAh--------AaQaVIN-HVL-GDFTkPQmdlvQ---------PQ---IDQ----AVLA-SEDFIK 177 Oenococcus ki...
5ZX8_A         170 ---Eg--LPPCAGRFN 180 Thermus thermophilus HB8
jgi:Desti_3057 183 y-----gVERAQQMLH 193 Desulfomonile tiedjei DSM 6799
EXX70965       208 k--D---LKRIKKKFA 218 Rhizophagus irregularis DAOM 197198w
XP_001616141   164 eclSdgeLKKIFKTFQ 179 malaria parasite P. vivax
XP_003293397   169 l--E---KGPKMFSEE 179 Dictyostelium purpureum
Q8EZN2         176 g--D---IDDVIEKYH 186 Leptospira interrogans
jgi:Turpa_2709 189 q--D---IKDVLARFK 199 Turneriella parva DSM 21527
Q6MJR3         176 ---Dg--IQKASTKFN 186 Bdellovibrio bacteriovorus HD100
Q04H98         178 gt----aLNVVTNRYN 189 Oenococcus oeni PSU-1
EHN58447       178 gi----aLNTITNRYN 189 Oenococcus kitaharae DSM 17330
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