Conserved Protein Domain Family

pfam01192: RNA_pol_Rpb6 
Click on image for an interactive view with Cn3D
RNA polymerase Rpb6
Rpb6 is an essential subunit in the eukaryotic polymerases Pol I, II and III. This family also contains the bacterial equivalent to Rpb6, the omega subunit. Rpb6 and omega are structurally conserved and both function in polymerase assembly.
PSSM-Id: 426112
Aligned: 342 rows
Threshold Bit Score: 27.1027
Created: 26-Apr-2021
Updated: 29-Sep-2021
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
Format: Row Display: Color Bits: Type Selection:
2PMZ_K            21 SLWQNRLTRYEIARVISARALQLamgapalidinnlsstDVISIAEEEFRRGVLP 75  Saccharolobus solfataricus P2
Q8DGQ8            18 ELIQHSANRYRITVQIANRAKQRrglease--dlddlplKPVIRAIIEMSDEVAQ 70  Thermosynechococcus elongatus BP-1
WP_015123293      18 QLVAASSNRYRITVQVAQRAKQRraldnee---fdevtiKPITRAILEMSDELTQ 69  Synechococcus sp. PCC 6312
Q2JJC6            21 ALINASKNRYRITVQVANRAKRRryedpdd---iedgwmKPIRRAVIEMSDELTE 72  Synechococcus sp. JA-2-3B'a(2-13)
jgi:Syn7502_00411 18 ELVAAAPNRYRITVQVANRAKLRryeeadd---yddhflKPIMRAIVEMSDELTQ 69  Synechococcus sp. PCC 7502
jgi:Pse7367_2255  18 DLVAASSNRYKITVQVANRAKHRryeeiee---yddramKPIVRAVIEMSDELTQ 69  Pseudanabaena sp. PCC 7367
Q31MH9            18 SLIVNSTNRYHVTLQIARRAKQAryeemen--lseetgiKPVLRAILEMSDELNQ 70  Synechococcus elongatus PCC 7942 = F...
WP_023171444      17 QLVDAAANRYRITVQVANRAKRRryedls----dddgnfKPVLRAIFEMSDELNE 67  Gloeobacter kilaueensis
jgi:UCYN_02520    18 ELLDAAPNRYRITVQVATRAKRRryeefdn---idnahmKPAVRAIIEMSDELNQ 69  Candidatus Atelocyanobacterium thala...
jgi:Chro_4344     20 ELIDAASNRYRITVQVANRAKRRryedfdn---vddpmmKPVIRAIIEMSDELTQ 71  Chroococcidiopsis thermalis PCC 7203
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap