1P9Q,2WBM


Conserved Protein Domain Family
SBDS

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pfam01172: SBDS 
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Shwachman-Bodian-Diamond syndrome (SBDS) protein
This family is highly conserved in species ranging from archaea to vertebrates and plants. The family contains several Shwachman-Bodian-Diamond syndrome (SBDS) proteins from both mouse and humans. Shwachman-Diamond syndrome is an autosomal recessive disorder with clinical features that include pancreatic exocrine insufficiency, haematological dysfunction and skeletal abnormalities. It is characterized by bone marrow failure and leukemia predisposition. Members of this family play a role in RNA metabolism. In yeast these proteins have been shown to be critical for the release and recycling of the nucleolar shuttling factor Tif6 from pre-60S ribosomes, a key step in 60S maturation and translational activation of ribosomes. This data links defective late 60S subunit maturation to an inherited bone marrow failure syndrome associated with leukemia predisposition.
Statistics
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PSSM-Id: 426098
Aligned: 240 rows
Threshold Bit Score: 48.9637
Created: 26-Apr-2021
Updated: 29-Sep-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1P9Q_C        31 IARLRKgGEE---FEVLV-DPYLARDLKE------GKEVNFEDLLAAEEVFKDAKKG-----ERASVDELRKIFGTD-DV 94  Archaeoglobus f...
Q6BKC7         8 RVFYKG--DEa-dFVIFIeDTDLVEKYKKg-----DTTIPLIDIVGIYKVFINRQGGnegvlDEASKQELTLQFGKS-DV 78  Debaryomyces ha...
XP_001487039   6 KLFYKG--SNvddFVIFVdDVNLREKYLKg-----DTTIPLIDIVSIYKVFVNRQGGlegvlDEASKNELSNEFGTT-DV 77  Meyerozyma guil...
CCE81216       6 KIFYGG--KEn-dFAVFIeSPETVEKYKH------DTTIPLIDVVSIYKIFVNRQGGsegvlDEASKSELQNEFNTA-DK 75  Millerozyma far...
EEQ40477       6 KIFYKG--SEy-dFVIFTeNPELIKKYRSg-----DTTIPLSDFISVFKVFVNRQGGvdgvlDEASKAELETEFGKSaNV 77  Clavispora lusi...
XP_001525927   7 KFFYKG--ADn-dFVIFVdDPELYKKYKSg-----DTTIPLIDIVSVFKVFINRQGGadgilDEASKQDLNNNFKTS-NV 77  Lodderomyces el...
Q59U89         8 KLFYKG--AEn-dFVIFIdDADLLAKYKKefstkgSSTIPIIDLVSIFKVFINRQRGaegilDEAAKSDLENEFKTS-NA 83  Candida albicans
XP_001386005   6 KVFYRG--SDs-dFIVFVeDPQSLVSYKK------DSSIPIVDVLSVYKVFTNRTGGadgifDEASKSELSNEFGKL-NK 75  Scheffersomyces...
XP_006685721   6 KIFYKG--EEn-dFVVFVeDREALDKFRE------DSSIPLVDVISVFQVFTNRQGGvegqlLQASKTELENEFGTK-NT 75  Yamadazyma tenu...
XP_001704856  47 VVSLKLsKNV---LEVIC-YQDAVIKWRE------NKSTSLDNVLVTNVIYSDAKQG-----ERATDAAIKEAGATEaE- 110 Giardia lamblia...
1P9Q_C        95 FEIARKIILEGEVQITAE 112 Archaeoglobus fulgidus
Q6BKC7        79 DEIIKIILKEGSDKSGTH 96  Debaryomyces hansenii
XP_001487039  78 DAIIKKILKEGSDKQGSS 95  Meyerozyma guilliermondii ATCC 6260
CCE81216      76 DEIIKKIIRDGSIRNKTE 93  Millerozyma farinosa CBS 7064
EEQ40477      78 DDVIKLILEKGDDKKSAG 95  Clavispora lusitaniae ATCC 42720
XP_001525927  78 DEVIKIILDKGSDKHNSD 95  Lodderomyces elongisporus NRRL YB-4239
Q59U89        84 DQVIKIILEKGEDKSKTG 101 Candida albicans
XP_001386005  76 DEVISKILKEGADRRGAE 93  Scheffersomyces stipitis CBS 6054
XP_006685721  76 DEVIKKIVLEGSDKSNAS 93  Yamadazyma tenuis ATCC 10573
XP_001704856 111 --AIQEILTRGHVSLSTQ 126 Giardia lamblia ATCC 50803
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