2F5N,6TC9,1TDZ,6LWM,3A45


Conserved Protein Domain Family
Fapy_DNA_glyco

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pfam01149: Fapy_DNA_glyco (This model is not part of the current CDD release)
Formamidopyrimidine-DNA glycosylase N-terminal domain
Formamidopyrimidine-DNA glycosylase (Fpg) is a DNA repair enzyme that excises oxidised purines from damaged DNA. This family is the N-terminal domain contains eight beta-strands, forming a beta-sandwich with two alpha-helices parallel to its edges.
Statistics
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PSSM-Id: 514038
Aligned: 596 rows
Threshold Bit Score: 49.0555
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2F5N_A         1 MPELPEVETIRRTLLP-LIVGKTI-EDV--RIFWPNIIRH--PrDSEAFAA---RMIGQTVRGLERRGKFLKFLLd---- 67  Geobacillus ste...
WP_012932595   1 MPELPEVEITARLLSE-GVAGARVeSTLapGI---NALKT--------FDPplhALDGTTLTGVSRRGKHLVVESd---- 64  Conexibacter wo...
WP_013838374   1 MPELPEVESLARFLDG-RTAGRTV-VAV--DVAAIAALKT--------FDPpatALVGGRVAGAGRHGKWLDVAVtpaag 68  Isoptericola va...
WP_013116736   1 MPELPEVEALAQFLGE-RAVGRAV-TRV--EVAAISALKT--------FRPpptALRGGTVLEASRHGKWLDLSVgsl-- 66  Cellulomonas fl...
WP_013884103   1 MPELPEVEALAGFLRE-RAVGRTV-TQV--GVGDIAALKTfrP--PPD------ALVGGTVVDASRHGKWLDLLVatp-- 66  Cellulomonas gi...
Q826A4         1 MPELPEVEALKDFLAD-HVVGHEV-VRV-----LPVAISV-----LKTYDPpvtALEGREITAVRRHGKFLDLEAdg--- 65  Streptomyces av...
WP_012946461   1 MPELPEVEALTAFLRE-HAVGSVV-TRV--DLAAVQAIKT--------FDPplsALGGLELTGVARHGKFLDLDVs---- 64  Geodermatophilu...
WP_011753653   1 MPELPEVEALALDL-RgRLDGHAI-AKI--HVAAFSALKT--------FDPplsALEGTLVDDVTRHGKFLDIEAs---- 64  unclassified No...
EON25757      97 MPELPEVEALALDL-KgRLLDRAI-TRI--DLAAFSALKT--------FDPplhALHGTLVEDVTRHGKFLDITAs---- 160
WP_012243927   1 MPELPELVGLSTYLSS-VLRGQLL-ESL--QIASFTALKTagV-QPEEILR---RA----VESVRRHGKFVDIEFgasa- 67  Renibacterium s...
2F5N_A        68 ---rD-ALISHLRMEGRY-Av--aSALEPlE------P----------HTH--V-VFCFT--DGSELRYRDVRKFGTM 117 Geobacillus stear...
WP_012932595  65 ---aGlVLLIHLMSAGRLqLy---EKRAG-Lr----dR----------TSR--I-LLRLD--GDRELRL---REFGTK 113 Conexibacter woesei
WP_013838374  69 sggdAlHLVFHLARGGWL-RwrdqAPTTP-V------AprlggssrgaALA--L-RVRFDdgSGFDLTEAGTRKRLAV 135 Isoptericola vari...
WP_013116736  67 -adgTlHVVWHLSRAGWV-RwydaLPERP-A------Rpg------ksPLA--L-RVGFDdgSGFDLTEAGTRKRLAV 126 Cellulomonas flav...
WP_013884103  67 -tgePlHLVWHLSRAGWV-RwsdqLATTP-Vr----pG----------RSPlaL-RVRLDdgSGFDLTEQGTRKRLAV 126 Cellulomonas gilvus
Q826A4        66 -----lHFVTHLARGGWL-HwrdkLPDAP-Pr----pG----------KGPlaL-RVALEtgEGFDLTEAGTQKRLAV 121 Streptomyces aver...
WP_012946461  65 ----GlHLVVHLARAGWL-HwrtgLPTAP-Pk----pG----------KGPlaV-RVHLEdgDGFDLTEQGTRKGLAV 121 Geodermatophilus ...
WP_011753653  65 ----GlHLVLHLARAGWV-RwrdeVPTIP-Pkp---sT----------KSTlaV-RIVLDdqSGLDVTEAGTRKSLAM 122 unclassified Noca...
EON25757     161 ----GtHLIMHLARAGWV-RwrdeVPPLP-Ar----pN----------SKNplAaRIVIDdeAGLDVTEAGTKKSLAI 218
WP_012243927  68 sdpsGiHLIFHLAKAGWLkYaa-kSAGEK-PapvkpgG----------YITarM-IFN-D--AKIDLTEAGTRKSLAI 129 Renibacterium sal...
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