Conserved Protein Domain Family
Clathrin_lg_ch

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pfam01086: Clathrin_lg_ch (This model is not part of the current CDD release)
Clathrin light chain
Statistics
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PSSM-Id: 513986
Aligned: 77 rows
Threshold Bit Score: 145.866
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_007406363   4 FPELEDFS-------GTGPTGT----DPTSDFLSRER-ELLG-EE----Fg-ETPKDY---SSNLTSnlQNQSEDQFgls 62 
2_pfamImport   1 -DDFGFFSss----dNGAAPAEe---DPAAAFLAQQEsEIAG-IEndegF--GALEGA---GQPLQSydSFGGESA---- 62 
XP_004737612   2 aDDFGFFSss----eSGAPEAAe--eDPAAAFLAQQEsEIAG-IEndegF--GAPAGShggLAQPGPasGAGSEDL---- 68 
XP_031809582   2 aDDFGLFSsg----sGAPGPAEe---DPAAAFLAQQEsEIAGiENddegF--GGAAGA---LQQPAAenGTGIENT---- 65 
XP_029707399   1 MDDFDMLNap----aTGNGVGVe--eDPAAAFLAQQEsEIAG-IEndegF--SILDSG---DVPSSLtdSNGGAVN---- 64 
XP_005159863   1 MDDFDMLSapq--gsAGNGVGAd--eDPAAAFLAQQEsEIAG-IEndegF---SILDS---GDVPSSlsQDQDGGAM--- 66 
XP_015200593   1 MDGFDLLNap----qTTAGNGVgveeDPAAAFLAQQEsEIAG-IEndegFs-ILDSGE---VPSSMSnnLTGDlgqda-- 69 
XP_006010759   1 MDEFEAFNtp---qvAANGLTTe--eDPAAAFLAQQEsEIAG-IEndegFs-ILDSGE---VPASL---QSQQADLV--- 64 
XP_003470921   1 MAELDPFGapagsalGNGVAGEe---DPAAAFLAQQEsEIAG-IEndeaFa-ILDGGA---PGPQPHgePPGGPDAV--- 69 
XP_003223384   1 MADFDIFAasq-paaGNGSLGGse-eDPAAAFLAQQEnEIAG-IEndegYniLENGEV---PPGMQGqeGLAADSI---- 70 
XP_007406363  63 syeddnmglsnsitqpqisvtgggnhpedlNSF-EEQypdlSQEAALAPTNGFSAPAPSLygnpstqsysntpavyaqtQ 141
2_pfamImport  63 ------------------------------ATV-NGD----LFQETNGPTDSYAAIARVD-------------------Q 88 
XP_004737612  69 ------------------------------GTTvNGD----VFQEANGPADGYAAIAQAD-------------------R 95 
XP_031809582  66 ------------------------------GTTvNGD----MFQEANGPSDGYAAVAQAD-------------------R 92 
XP_029707399  65 ------------------------------GDF---------HGESNGPSDAYAAISNAD-------------------R 86 
XP_005159863  67 ----------------------------------NGD----LHGESNGPSDVYAAISSVD-------------------R 89 
XP_015200593  70 -------------------------ndavdGAI-NGE----FYQESNGPSDAYAAISQVD-------------------R 100
XP_006010759  65 ------------------------------DGAvNGE----TFQESNGPMDAYAAISQAD-------------------R 91 
XP_003470921  70 ------------------------------DGVmNGE----YYQESNGPTDSYAAVSQVD-------------------R 96 
XP_003223384  71 ------------------------------DGVtNGD----LYQESNGPTDCYAAISQAD-------------------R 97 
XP_007406363 142 MEEDSEHIKKWRQTQAEEIQIRDERSAAKREETIAAAEKAIDDFYHGYNTQKEKNIARN--------K------------ 201
2_pfamImport  89 QRQEPESLRKWREEQKARLEELDSASRAAETEWKEKAKKELEDWHVRQNEQMEKNKANNsrlspsvaRiadkafyeqpna 168
XP_004737612  96 LTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQVEKNKINN--------R------------ 155
XP_031809582  93 LSQEPESIRKWREEQKKRLQELDAASKVTEQEWREKAKRDLEEWNVRQNEQVEKNKVSN--------Riadkafyqqpda 164
XP_029707399  87 LQAEPESLRKWREEQQDRLEVLDKNSRKQEAEWKEKAKVELEEWNARQNEQLEKTKTNN--------Rvldedfykqpfs 158
XP_005159863  90 LQAEPESLRKWREEQRDRLEELDANSRKQEAEWKEKAKLELEEWHTRQNEQLEKTKVNN--------R------------ 149
XP_015200593 101 LQSEPESLRKWREEQLERLEVLDANSRKQETEWKEKAKVELEEWYTRQDEQLEKTKVNN--------R------------ 160
XP_006010759  92 LHSEPESIRKWREEQKERLEMLDANSRKQETEWKEKAKKELEEWYTRQEELLEKTKANN--------R------------ 151
XP_003470921  97 LQSEPESIRKWREEQTERLEALDANSRKQEAEWKEKAIKELEEWYARQDEQLQKTKANN--------R------------ 156
XP_003223384  98 LQTEPESIRKWREEQQERLEVLDANSRKQEAEWKEKAIKELEEWYERQDEQLEKTKVNN--------R------------ 157
XP_007406363 202 ------EQEATFLQSRVDLLGqGTTWQRITDLIDLqDSRSKTTSkstHDLSRFKEVLLSLKREgetaPGAA 266
2_pfamImport 169 eaigyvASEEAFLKECDEDSP-GSEWERVARLCDF-NPKTNKQS---KDVSRMRSVLISLKQT----PLVR 230
XP_004737612 156 ------ASEEAFVKESKEETP-GTEWEKVAQLCDF-NPKSSKQC---KDVSRLRSVLMSLKQT----PLSR 211
XP_031809582 165 diigyvASEEAFLKESKEEVP-GTEWEKVAQLCDF-NPKSSRQC---KDVSRMRSMLISLKQN----PLSR 226
XP_029707399 159 eligyvAAEEAMISDLDDNNP-GTEWERVARLCDF-NPKSSKQA---KDVSRMRSVLISLKQS----PLVR 220
XP_005159863 150 ------AAEEAMVSELDENSP-GTEWERVARLCDF-NPKSSKQA---KDVSRMRSVLISLKQA----PLVR 205
XP_015200593 161 ------ATEEALVSDMDENNP-GTDWERVARLCDF-NPKSSKQS---KDVSRMRSVLISLKQS----PLVH 216
XP_006010759 152 ------AAEEAFVTETEEINP-GSEWERVARLCDF-NPKSSKQA---KDVSRMRSVLISLKQA----PLVH 207
XP_003470921 157 ------AAEEAFVNDIDESSP-GTEWERVARLCDF-NPKSSKQA---KDVSRMRSVLISLKQA----PLVH 212
XP_003223384 158 ------AAEEAFVNDVDESSP-GTEWERVARLCDF-NPKSSKQA---KDVSRMRSVLISLKQA----PLVR 213
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