5NJ3


Conserved Protein Domain Family
ABC2_membrane

?
pfam01061: ABC2_membrane 
Click on image for an interactive view with Cn3D
ABC-2 type transporter
Statistics
?
PSSM-Id: 426023
Aligned: 215 rows
Threshold Bit Score: 46.883
Created: 26-Apr-2021
Updated: 29-Sep-2021
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
5NJ3_A 389 VSKRSFK--NLLGNPQAS-I--------AQIIVT-VVLGLVIGAIYFG-----LkndstgiqnR------------AGVL 439 human
Q8IMM1 533 MLNRDIQ--LAFRDFAMGlLgqcgsnpkLGDVPI-QFRDPIYGTMNPSftd----------------------fvaPGVI 587 fruit fly
Q8T674 482 VEQQLALsfETLAKQQANiT--------MNPIKT--VTPTVYGNPNSKfid----------------------flaPGMV 529 Dictyostelium discoideum
Q9CIV1 137 KQALQNLisKLPQTSGQSfS--------TNFRVDtEQYKVTSHYLYG----------------DpsstnatfddlaPILV 192 Lactococcus lactis su...
Q81D95 104 DSSKNRAvlQVLQKSTEKnD--------VSIMKP-EVNYLHGSKDFTmfd-----------------------glgPVLI 151 Bacillus cereus ATCC ...
Q82E93  26 ATAARVL--RQLRHDPRTiA--------LMILIP-CVMLFLLRYVFDgsprt-------------------fdsigASLL 75  Streptomyces avermitilis
Q8Y8H8 133 KATGEAL--AKAGIDPNSiP--------TLTASP-EKLTLSTDYVYG----------------Dkdtsf--fdtisPIFI 183 Listeria monocytogenes
Q8DW39 168 GINSGIQ--AQAANNTGDkQ--------TKVNTKqTKFDLSENYIYG----------------Dkdttf--ftkmtPILM 219 Streptococcus mutans
Q8E1U2 125 MNSKELIsqVKILANKNPkL--------AQSLQT-RSKYIKEKYNYG----------------Nkntgf--fakmiPILM 177 Streptococcus agalact...
Q97MF5 131 NAAQNIA--KAAKGDKTKfY--------NGVKNY-QKGNFVSETKYTNgerekQkts----------------ttsIGFL 183 Clostridium acetobuty...
5NJ3_A 440 FFLTTNQCfsSVSAVEL-FVVEKKLFIHEYISGYyRVSSYFLGKLLSDLlPMRMLPSIIFTC-IVYFML----GLKPKad 513 human
Q8IMM1 588 LTIVFFLAv-ALTSSALiIERTEGLLDRSWVAGV-SPFEILFSHVITQF-VVMCGQTTLVLI-FMLVVFgvtnNGDL--- 660 fruit fly
Q8T674 530 CLISFAHAi-SITSVSFvKEKVDGSLDRLFAYGV-RTSSIVFGHFLGHL-PLLLVQITVLLL-IAIY------GFNVP-- 597 Dictyostelium discoideum
Q9CIV1 193 GAFAFFLVl-LISGISLvNERTSGMLGRMLVTPV-KRTEIVTGYTLSYG-ILAMIQTALMVV-FTYWIL----GVHHN-- 262 Lactococcus lactis su...
Q81D95 152 GFFTFFFVf-ILSGVSFvRERLSGTLERLLSTPV-RRWEIVAGYIIGFG-IFAFIQSIIIVS-FSVYIL----DLYVA-- 221 Bacillus cereus ATCC ...
Q82E93  76 GIFPLITMf-LVTSIATlRERTSGTLERLLAMPL-GKGDLIAGYALAFG-ALAIIQSALATG-LAVWFL----GLDVT-- 145 Streptomyces avermitilis
Q8Y8H8 184 GFFVFFFVf-LIAGISFlRERTTGTLERLMATPI-KRIELELGYLIGFG-IFALLQSILVAV-FSIQVL----GMMQN-- 253 Listeria monocytogenes
Q8DW39 220 GFFVFFFVf-LISGMALlKERTTGTLDRLLATPV-KRSDIVFGYMLSYS-FIAALQTTVIVL-STIWLL----DLDVL-- 289 Streptococcus mutans
Q8E1U2 178 GFMVFFFVf-LISGMALlKERTSGTLDRLLATPV-KRSDIVFGYMLSYG-ILAIIQTIVIVL-STIWLL----DIQVV-- 247 Streptococcus agalact...
Q97MF5 184 IASIIYLS--TMITTLIlVDKKDGVYNRMFASGV-NRFRYIVGSMFSFV-AVNLIQIAGVFLvMKYVV-----KIDLG-- 252 Clostridium acetobuty...
5NJ3_A 514 AF---FVMMFTLMMVAYSASSMALAIAAGQSVVSVATLLMTICFVFMMIFSGLLVNLTTI-AsWLSWLQYFSIPRYGFTA 589 human
Q8IMM1 661 -----FWVIVLTLLQGMCGMCFGFLISSVCELERNAIQLALGSFYPTLLLSGVIWPIEGMpV-VLRYISLCLPLTLATSS 734 fruit fly
Q8T674 598 IEgniALVFLMTVSLAFVGMSLGLVISAVSRVETEAIQLSLGVYFPTLICSGTLWPLQSLpN-WFVWFPNILPATHAGNA 676 Dictyostelium discoideum
Q9CIV1 263 -Gn-iGWVFVINFFIAIIALLFGLLLSTLAKTEFQFVQMIPLAIVPQFLFSGLI-PVDTMpV-ILQAIAHCIPVYYGISA 338 Lactococcus lactis su...
Q81D95 222 -Gs-iWLTLLITCMLSLTALTLGTFLSAYANNEFQMIQFIPLVIVPQIFFSGLF-PMESM---NLQMLGKVFPLTYGADA 295 Bacillus cereus ATCC ...
Q82E93 146 -Gs-pWLLLLVALLDALLGTALGLFVSAFASSEFQAVQFMPAVIFPQLLLCGLFTPRSAMhP-ALEAISDVLPMSYAVDG 222 Streptomyces avermitilis
Q8Y8H8 254 -Gs-lFYVLLITLTLGMVSLALGILLSTFANNEFQIVQFIPIVIVPQVLFCGIF-PLDGMaD-WLVWIAHIMPLYYGANA 329 Listeria monocytogenes
Q8DW39 290 -Gs-mGDVIVVNILFALVALSFGLLLSTLAQSEFQMMQFIPIVIVPQIFFSGII-PLDSMaD-WVQSLGKILPLYYAGHA 365 Streptococcus mutans
Q8E1U2 248 -Gs-iFSVIIVNFILALVALSLGILMSTLAKSEFQMMQFIPLIIMPQLFFSGII-PLENMaS-WAQTVGKILPLSYSGDA 323 Streptococcus agalact...
Q97MF5 253 -Ps-pIKLYLVLVVFGIACVSLGVLISNRCKDLKQANSMTVLISTPVAMLGGCYWPKEVMgS-TLQRIGDFVPSTWAMNA 329 Clostridium acetobuty...
5NJ3_A 590 LQHN 593 human
Q8IMM1 735 LRSI 738 fruit fly
Q8T674 677 MRDI 680 Dictyostelium discoideum
Q9CIV1 339 MQEV 342 Lactococcus lactis subsp. lactis
Q81D95 296 MRQV 299 Bacillus cereus ATCC 14579
Q82E93 223 MNEV 226 Streptomyces avermitilis
Q8Y8H8 330 LTSI 333 Listeria monocytogenes
Q8DW39 366 LSKI 369 Streptococcus mutans
Q8E1U2 324 LTKI 327 Streptococcus agalactiae serogroup V
Q97MF5 330 VDKI 333 Clostridium acetobutylicum
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap