1SFE,1EH6


Conserved Protein Domain Family
DNA_binding_1

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pfam01035: DNA_binding_1 (This model is not part of the current CDD release)
6-O-methylguanine DNA methyltransferase, DNA binding domain
This is the C-terminal DNA-binding domain of 6-O-methylguanine-DNA methyltransferases.
Statistics
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PSSM-Id: 513946
Aligned: 1197 rows
Threshold Bit Score: 30.4289
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1SFE_A          96 AFQQQVWQALRTIPCGETVSYQQLANAIGK------------PKAVRAVASACAANK---LAIVIPCHRVVRGDGSLSGY 160 Escherichia c...
jgi:Psta_0102    9 RIKRDVIDLTCQIPRGKIVTYSTIAGQLD--------------VMPRHVAYILAMLDd-qERSEIPWHRVVADGGVIRST 73 
WP_025227345    37 PSPMQVRDAIAAIPVGQSKTFGQLRADLARdsgadvtcpfaaGVFWRVVAEAAEEDRaegATEVTPWWRVTRDGK-PNPK 115 Fimbriimonas ...
109_pfamImport   1 EFHQKIYELVRRIPYGKVSSYGQLAVLAGR------------PGAARAVGHAMRVCR----DPSIPCHRVVHQDGSTTAS 64 
CDB30031         3 GFSRRLYALVRQIPPGQVATYGQLALLLGN------------PRMSRAVGTALSACR----DDSIPCHRVVSRLGGLSNA 66 
Q2S0J7           9 SFYDSVWRVVAQIPVGRVTTYGDIAAHLGR------------RGAARIVGWALKD-A---VGGDLPCHRVVNRNGVLTGR 72  Salinibacter ...
WP_013664785     5 NFYECVYALVRQIPEGRVTSYGAIARALGR------------DGAARMVGYAMGNAGk--ADPPVPAHRVLNSKGQLSAK 70  Olivibacter
34_pfamImport    1 SFYDQVFELVRLIPKGRVTSYGAIAKSLGA------------GGSARMVGYAMSNAGl--ADPPVPAHRVVNSSGLLTGK 66 
WP_008508711     5 SFYDKVYEIARLIPYGRVTSYGAIANVLGT------------KGTARMVGYAMGHCGg--IHPPVPAHRVVNSQGMLTGR 70  Mucilaginibac...
WP_013765788     5 NYQELVFDITRLIPPGRVCSYGAIADYLA-------------LGSARMVGWALRNSF---IHDGIPAHRVVNSKGELSGR 68  Haliscomenoba...
1SFE_A         161 --RW--GVSRKAQLLRREA 175 Escherichia coli B
jgi:Psta_0102   74 a-KR--DPALQRQLLMEEG 89 
WP_025227345   116 l-PG--GESRHRELLGEEG 131 Fimbriimonas ginsengisoli
109_pfamImport  65 fdAI--ERHTQQRLLEAEG 81 
CDB30031        67 f-APf-GRESHRLLLELEA 83 
Q2S0J7          73 --RHfeTPHVMAERLRSEG 89  Salinibacter ruber DSM 13855
WP_013664785    71 aaFG--HPTLMQQLLENEG 87  Olivibacter
34_pfamImport   67 fhFK--TPDLMQELLEKEG 83 
WP_008508711    71 fhFP--SPNLMQQMLENEG 87  Mucilaginibacter paludis
WP_013765788    69 --AHfnPPSLMQQLLEAEG 85  Haliscomenobacter hydrossis
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