3IMQ,3R2D


Conserved Protein Domain Family
NusB

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pfam01029: NusB (This model is not part of the current CDD release)
NusB family
The NusB protein is involved in the regulation of rRNA biosynthesis by transcriptional antitermination.
Statistics
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PSSM-Id: 513941
Aligned: 62 rows
Threshold Bit Score: 75.385
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3IMQ_A        13 ECAVQALYSWqlsqndIADVEYqfla------eqdvKDV-DVLYFRELLAGVATNTAYLDGLMKPYLSRLLEELGQVEKA 85  Escherichia col...
WP_003517649  12 ETALKILYDI------NEKGAYsnislnkylngqefESI-DRAFITDIVYGTLKWQYTIDYLIEKFSSVKIKKISPWIFN 84  Acetivibrio the...
Q2FZ67         7 SLAFDTIQDI------LNEGAYsnlrinevlsenelNAM-DKALFTEIVYGTVKRKYTLDFYLKPFV---KTKIKAWVRQ 76  Staphylococcus ...
Q1G9I2         7 TVALDTLMKV------INQGSYsnislnhalkaaklPGE-ESRLATNLVYGTIQYQLYLEYQLKDLVKARLR--EPYIKP 77  Lactobacillus d...
Q9CEF3         7 QTALDVLNDI------FGNDAYanisldrnlrdselSTV-DKAFVTALVYGVVSKKDLLEWHITPFL---KKEPKPWAKM 76  Lactococcus lac...
Q8R6A9         5 KVAINLISQV-------DRGAYsnialnetfktlnvNSK-EKAFITEIFYGVIRNKKFLDYIIEK---NTKEIKKEWIRN 73  Fusobacterium n...
Q8XJL5         5 KIIVEILDNV------LLNGAYsnieinkqfasndiDPK-DKGLITEVVYGTIKYKKMIDIILSSFV-ADIGKIDESVVN 76  Clostridium per...
Q6MU26        14 YIAFDILKKV------FVNKAYsnvllnk-iskkdlNQQ-TKDFIFNLVHGVISNKIHLDYLLTKLI--DVKKTSIDLQI 83  Mycoplasma myco...
Q6AS22         7 YIAAETLCQV------YKKQQPvkpileklcqqkqlNPR-ERSLAMNMVFGVLRKRQYLDILLRKLSTVRLKKLDPFVHQ 79  Desulfotalea ps...
Q3AC21         5 ELVIKTLVEV------EKNNSYvnlllp--klianlAKKeDKDFVVELTYGVLKQLKLLDYMAGKLL-KKRSKLPPFVIN 75  Carboxydothermu...
3IMQ_A        86 VLRIALYELSKRSDVPYKVAINEAIELAKSF-GAENSHK--FVNGVLDKAA 133 Escherichia coli K-12
WP_003517649  85 ILRMGIYQLIYTDKIPFFAACNESVKLAAKY-GHAASSK--YVNAVLRNIA 132 Acetivibrio thermocellus
Q2FZ67        77 LLWMSIYQYVYLDKVPNHAIINEAVEIAKER-GGYHNGN--VVNGILRTMM 124 Staphylococcus aureus subsp. aureus NCTC 8325
Q1G9I2        78 LLLMSAYQIFFLDKVPNRAVLDEANKLAKVY-GRPKSSGyrLVNGILHSLL 127 Lactobacillus delbrueckii subsp. bulgaricus ...
Q9CEF3        77 LLLLTVYQILFMDKVPTSAAVDEAVKIAKRR-DGQATAN--FINAVLRNFM 124 Lactococcus lactis subsp. lactis
Q8R6A9        74 LLRISIYQITFM-DSDDKGVVWEGTELAKKK-YGIPISK--FINGTLRNYL 120 Fusobacterium nucleatum subsp. nucleatum
Q8XJL5        77 ILRSAIYQMKFLDRVPPYAIVNEAVNLTKET--EPNLAK--FINGVLRNYL 123 Clostridium perfringens
Q6MU26        84 ILLISLYQMIYLNSIPNYAIVNESVNLIKTT--SQKQAN--FINAILNKFL 130 Mycoplasma mycoides subsp. mycoides SC
Q6AS22        80 ALTVGLYQLFFLDSIPESAIVNEAVNSCKTAkVHKRLHG--FVNGILRNAT 128 Desulfotalea psychrophila
Q3AC21        76 AIRVGLYQLYFLDKVPTYAAINETVEAVKRN--YRGFTG--VVNGVLRNFI 122 Carboxydothermus hydrogenoformans Z-2901
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