4CSU,1UDX,1LNZ


Conserved Protein Domain Family
GTP1_OBG

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pfam01018: GTP1_OBG 
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GTP1/OBG
The N-terminal domain of the GTPase OBG has the OBG fold, which is formed by three glycine-rich regions inserted into a small 8-stranded beta-sandwich these regions form six left-handed collagen-like helices packed and H-bonded together.
Statistics
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PSSM-Id: 425990
Aligned: 609 rows
Threshold Bit Score: 91.2522
Created: 26-Apr-2021
Updated: 29-Sep-2021
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4CSU_9         4 VDEASILVVAGDGGNGCV--SFRREKYIPKGGPD---GGDGGDGGDVWMEADENL---NTLIDYR-FEKSFRAERGQNGA 74  Escherichia col...
EGT52232      27 VDKYVINLKAGSGGSGLA--RY---------------DGVGGRGGNIYFVAKPSLafsDIKKRLK-NKMKIRAENGESAT 88  Caenorhabditis ...
XP_784849     47 VDWRRVRVAGGNGGDGCV--SVRREAHVEFGGPD---GGDGGNGGHVILECEQSL---KSLERVL---PLYRGEAGGKGK 115 purple sea urchin
XP_001747988  90 VDHKSIVVRGGRGGNGCV--AWYRNSARTRKFPE---GADGGRGGDVILVADGGM---STLATVP---PVMVGYAGKPGG 158 Monosiga brevic...
EGD76224      71 VDLRRVFVRGGKGGLGCF--SYENLGYKRKRRPD---GADGGRGGSVNLTVDETV---GSLEHIP---ATISGITGGQGS 139 Salpingoeca ros...
7_pfamImport   1 VDRIRVKATGGHGGNGCA--SFFAESAMRKR-PN---GGHGGAGGDVLIEASDKM---QNLANAT---HHFRGGAGTNGM 68 
EEC48920      94 VDRVRVQVSGGAGGKGSLssEQMRRRHHLR--PD---GGHGGHGGQVFLVADPRE---QTLSWTH---PHAQAEKGTNGS 162 Phaeodactylum t...
EDO07610      24 VDLKLVKCIGGKGGDGAV--VFSKHGPHRLSGPGlpaGGAGGKGGNVYAIPMDKH---DHRVDLRhIPGAVKAPDGTIG- 97  Babesia bovis
Q4Q1C0        16 VDRVKVLLCSGAGGDGAS--IMAHEHGNEFAGPG---GGNGGNGGNVMLQCVKQH---TDLSHIEdLGSQISAGAGCCGF 87  Leishmania major
Q4CQ87        45 VDAVKMLVSSGAGGDGAS--VMSHENGNEFAGPG---GGNGGNGGNVMLRCSKRI---ADLSHLKeMGSQITASPGSVGF 116 Trypanosoma cruzi
4CSU_9        75 SRDCTGKRGKDVTIKVPVGT---RVID------QGTG--------Et----MGDMTK-HGQRLLVAKGGWHGLGN----- 127 Escherichia col...
EGT52232      89 KTSLIGQHAKHQLFDVPIGI---EVVN------RTDN--------Tl----IARCSK-PFHRYMIARGGEGGHSK----- 141 Caenorhabditis ...
XP_784849    116 SQNRHGRNGKHNVIKVPLGT---LVK--------ENN--------Vi----IKDLEN-EHDMFMLAAGGEGGRGN----- 166 purple sea urchin
XP_001747988 159 SANMLGAAAPPRRMRVPVGT---LIHR--------DG--------Ev----VADLTE-PGQEFLAARGGAAGRGN----- 209 Monosiga brevic...
EGD76224     140 SNNKLGANAKPRTIKVPAGT---IVYD-------EDG--------Kv----VADLER-PGESFCAAVGGKGGRGN----- 191 Salpingoeca ros...
7_pfamImport  69 ANDSAGRRGKHCHVKVPCGT---LVKr-----iVDQM--------Ev----VCDLDE-PGATFLAAKGGKPGLGNrilag 127
EEC48920     163 SKECSGRKGENLIIRVPSGNeesLTDS------VRRT--------Vv----IADLDE-PGSYALVARGGQGGIGS----- 218 Phaeodactylum t...
EDO07610      98 NRYASGRPGNDVKLKMPLGT---LVYKlepsflHDSDkcwrqlcwSwkrslIADINDaSHSPILLARGGCGGRGN----- 169 Babesia bovis
Q4Q1C0        88 SREAHGKRGQDLWLQLPLGT---QVVD------MDTN--------Ev----QYDMDE-EGMQIVLLEGGQGGKGN----- 140 Leishmania major
Q4CQ87       117 ARTAHGKRGKDLLLELPVGT---EVVD------LDTN--------Ev----VYDVDE-DGMELLLLEGGQGGKGN----- 169 Trypanosoma cruzi
4CSU_9       128 --TRFKS-SVNRTPR-----Q--KTNGTPGDKRELLLELML 158 Escherichia coli K-12
EGT52232     142 --MSYKSvFEYRLQKknwitF----RGARGETIDVELHLKL 176 Caenorhabditis brenneri
XP_784849    167 --RSFMT-AQHKTPM-----M--GTCGTPGEERVLHLELRT 197 purple sea urchin
XP_001747988 210 --TGGLErTRAQQPMd----E--RAVGKPGEDIRYLFDlrt 242 Monosiga brevicollis MX1
EGD76224     192 --SGGLK-HTRCVSF-----DdeAKQGTPGEEKRFVLELKT 224 Salpingoeca rosetta
7_pfamImport 128 ktTKFGR-LRKHMPE-----N--KTTGHPGTSQYYELELKT 160
EEC48920     219 --SYYAS-AQGPTPDakiliR--KAKPEPGEIAFLELELKL 254 Phaeodactylum tricornutum CCAP 1055/1
EDO07610     170 ---------TMRTPY-----H--AEYGGEADEGYYEIELKS 194 Babesia bovis
Q4Q1C0       141 --AAFAN-KWHHSPI-----E--STKGLPGNTMLAQIELKT 171 Leishmania major
Q4CQ87       170 --AAFAN-KWHHSPT-----E--STRGLPGNTMLVQFELKT 200 Trypanosoma cruzi
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