Conserved Protein Domain Family
Flavi_NS2A

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pfam01005: Flavi_NS2A 
Flavivirus non-structural protein NS2A
NS2A is a hydrophobic protein about 25 kDa is size. NS2A is cleaved from NS1 by a membrane bound host protease. NS2A has been found to associate with the dsRNA within the vesicle packages. It has also been found that NS2A associates with the known replicase components and so NS2A has been postulated to be part of this replicase complex.
Statistics
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PSSM-Id: 279359
Aligned: 2 rows
Threshold Bit Score: 297.909
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P03314 1139 GLVSMMIAMEVVLRKRQGPKQMLVGGVVLLGAMLVGQVTLLDLLKLTVAVGlhfhemNNGGDAM-----YMALIAAFSIR 1213 Yellow fever virus 17D
P17763 1138 GLLCISIMIEEVMRSRWSRKMLMTGTLAVFLLLTMGQLTWNDLIRLCIMVG------ANASDKMgmgttYLALMATFRMR 1211 Dengue virus 1 Naur...
P03314 1214 PGLLIGFGLRTLWSpRERLVLTLGAAMV----------EIALGGVMG-------------GLWKYLNAVSLCILTINAVA 1270 Yellow fever virus 17D
P17763 1212 PMFAVGLLFRRLTS-REVLLLTVGLSLVasvelpnsleELGDGLAMGimmlklltdfqshQLWATLLSLTFVKTTFSLHY 1290 Dengue virus 1 Naur...
P03314 1271 SRKASNTILPLMALLtPVTMAevrlaamffcavviigvlhqnfkdTSMQKT--IP 1323 Yellow fever virus 17D
P17763 1291 AWKTMAMILSIVSLF-PLCLS------------------------TTSQKTtwLP 1320 Dengue virus 1 Nauru/West Pac/1974
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