4FQX


Conserved Protein Domain Family
MHC_II_alpha

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pfam00993: MHC_II_alpha (This model is not part of the current CDD release)
Class II histocompatibility antigen, alpha domain
Statistics
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PSSM-Id: 513912
Aligned: 77 rows
Threshold Bit Score: 65.2945
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4FQX_C         15 NHTFLH-TVycqDGSPSVGLSEAYDEDQLFFFDFSQNTRVPRLPEFADwAQE------QGDAPAILFDKEFCEWMIQQIG 87  human
XP_019210807   23 GDVHINgCS-----DFDAEDMYGLDGEEVAYADFNNHTEVYILPPFAE-PMIypg-ayKQAVTELKVCRHNLKALRAVMK 95 
XP_019210809   23 GDVHINgCS-----DFDAEDMYGLDGEEVAYADFNNHTEVYILPPFAE-PMIypg-ayKQAVTELKVCRHNLKALRAVMK 95 
XP_011484642   26 EDFGILgCS-----DYDQEYMYALDGEEKWYADYKKETGVGPQLPLGG-HFInpd-gyQFAKVYEQVCRRNLKALKKTTK 98 
19_pfamImport   1 EDIGITgCS-----DLDGEDMFGLDSEERWYADFSKGEGVYGTPPFID-PVTfeg-fySQAVADLQTCKTSLDITRKSLK 73 
XP_029695925   22 EDIGITgCS-----DLDGEDMFGLDSEERWYADFSKGEGVYGTPPFID-PVTfeg-fySQAVADLQTCKTSLDITRKSLK 94 
22_pfamImport   1 EDVHIRgCS-----DFDGEDMYGLDGEERWYADFKRGEGVYALPDFVD-PLKfpegtySQAVADQQICKINLGISRKGNK 74 
23_pfamImport   1 EDIRIVgCS-----DFDGEYMHGLDGEELWYADFRRGEGVYAQPDFID-PIKyeg-fySTAVAVLQICKFNLGIFRKGYK 73 
29_pfamImport   1 DSFRVIgCS-----DTDGLDMMTLDGEEVWHADFIHETGVDTLPDFVS-HPSfsg-lyEQSVGQQQLCKNNLKIIRTGLK 73 
XP_069055119   25 IDINVIgCK---SDDPVAQDEAQLDGDEMFYADFDKKEMILTLPAFAD-SFGvdpgwvQGAIANRQICINNLEVAIKAEN 100
4FQX_C         88 PKLDG 92  human
XP_019210807   96 DYPSN 100
XP_019210809   96 DYPSN 100
XP_011484642   99 GLQLE 103
19_pfamImport  74 DMPPE 78 
XP_029695925   95 DMPPE 99 
22_pfamImport  75 DMPRE 79 
23_pfamImport  74 DMPRE 78 
29_pfamImport  74 DIPDP 78 
XP_069055119  101 NPPEN 105
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