5DOT


Conserved Protein Domain Family
CPSase_sm_chain

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pfam00988: CPSase_sm_chain (This model is not part of the current CDD release)
Carbamoyl-phosphate synthase small chain, CPSase domain
The carbamoyl-phosphate synthase domain is in the amino terminus of protein. Carbamoyl-phosphate synthase catalyzes the ATP-dependent synthesis of carbamyl-phosphate from glutamine or ammonia and bicarbonate. This important enzyme initiates both the urea cycle and the biosynthesis of arginine and/or pyrimidines. The carbamoyl-phosphate synthase (CPS) enzyme in prokaryotes is a heterodimer of a small and large chain. The small chain promotes the hydrolyzis of glutamine to ammonia, which is used by the large chain to synthesise carbamoyl phosphate. See pfam00289. The small chain has a GATase domain in the carboxyl terminus. See pfam00117.
Statistics
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PSSM-Id: 513908
Aligned: 540 rows
Threshold Bit Score: 147.097
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5DOT_A         37 IVLEDGTKMKGYSFGhP--SSVAGEVVFNTGLGGYPEAITDPAYKGQILTMANPIIGNGGApdttaldelglsKYLES-N 113  human
AEB08907        9 LALEDGLVLSGRSFTgS--GEAVGEVVFNTSMTGYQEILTDPSYKGQIVTMTYPMIGNYGVn----------lEDVES-R 75  
WP_013638981    9 LALEDGTYYEGYSFGaE--GETSGEVVFTTSMTGYQEIITDPSFKGQIVTMTCPLIGNVGAn----------eEDVES-N 75   Desulfurobact...
WP_012963890    6 LALEDGTCFVGYSFGaE--GEAQGEVVFNTSMTGYQEILTDPSYKGQIVVMTYPHIGNYGVn----------dEDIES-S 72   Hydrogenobact...
WP_012676887    6 LALEDGHFFYGYAFSgFnkRETGGEVIFNTSMTGYQEILTDPSYKGQIVVMTPSEVGNYGIn----------sEDVES-E 74   Persephonella
WP_012545700    6 LVLKDGTVFEGFSFGaE--GESIGEVVFNTSITGYQEILTDPSYKGQIVVMTYTQMGNYGVn----------eEDVESfG 73   Thermodesulfo...
WP_013681987    6 LVLETGDVFEGISIGkD--GTTVGEVVFNTAMSGYQEILTDPSYKGQIVNMTYTQIGNYGLn----------dEDNES-D 72   Hippea maritima
WP_012810671   11 LVLKNGLVFEGVHFGaT--GTRFGEVVFNTGMTGYQEILTDPSYYGQIVTMTYPLIGNYGVn----------vDDVES-R 77   Alicyclobacil...
WP_013277878    5 LVLEDGTIFTGKAFGaVeeG-AEGEIVFNTSMTGYQEILTDASYKGEIVTMTYPLIGNYGIn----------eDDIES-Y 72   Acetohalobium...
WP_013406263    6 LVLEEGSIFKGKIFGkE--GETSGEIVFNTSMTGYQEILTDPSYKGEIVCMTYPLIGNYGIn----------sDDFES-I 72   Halanaerobium...
5DOT_A        114 GIKVSGLLVLDYSkDYNHWLATKSLGQWLQEEKVPAIYGVDTRMLTKIIRDKGTMLGKI 172  human
AEB08907       76 GVQAEGFIIKEYYaYPSNWRARGTLADYLEASGRLGVEGIDTRAVTKRLREAGAMRGII 134 
WP_013638981   76 GPKAEGFIVKEISeIYSNWRAENSFEDYLKEYNIVGICEIDTRELTKKLRSVGTMRGVI 134  Desulfurobacterium thermolithotrophum
WP_012963890   73 RVQVNGFVVKELSnFYSSWRAKKSLEEYLKDHGVVGIQGIDTRALVKRIREKGTLRGII 131  Hydrogenobacter thermophilus
WP_012676887   75 RVHVNGFVIKDLSsIVSNWRSEKSLEEYLEENEVIGIFGIDTRALVRIIRQYGVMKGYI 133  Persephonella
WP_012545700   74 GPKVEGFIVKEYKnYPSNWRSKGSLGDYLKNYGIVGIHGIDTRALTKHLRDKGAQMGII 132  Thermodesulfovibrio
WP_013681987   73 RPFVEGFVVKEASvIHSNFRAKETLNEYLKRHSIVGIAEIDTRKLTKLLRVKGSLRGGI 131  Hippea maritima
WP_012810671   78 HPHVRGFAVRTFCeWPSHHKLVDKLESYLVQHDIVGIAGIDTRELTKAIRTVGAMPGVV 136  Alicyclobacillus acidocaldarius
WP_013277878   73 TSHVNGFIVKEFCaQPSNWRALDKLENYLKEHGIMGISDIDTRALTKKLRIHGTMKGII 131  Acetohalobium arabaticum
WP_013406263   73 KPHVNGFIVKEFSnNPENWRLKKKLELYLKENNITGITGIDTRALTKTLRRQGTMRGII 131  Halanaerobium hydrogeniformans
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