5DOT


Conserved Protein Domain Family
CPSase_sm_chain

?
pfam00988: CPSase_sm_chain 
Click on image for an interactive view with Cn3D
Carbamoyl-phosphate synthase small chain, CPSase domain
The carbamoyl-phosphate synthase domain is in the amino terminus of protein. Carbamoyl-phosphate synthase catalyzes the ATP-dependent synthesis of carbamyl-phosphate from glutamine or ammonia and bicarbonate. This important enzyme initiates both the urea cycle and the biosynthesis of arginine and/or pyrimidines. The carbamoyl-phosphate synthase (CPS) enzyme in prokaryotes is a heterodimer of a small and large chain. The small chain promotes the hydrolysis of glutamine to ammonia, which is used by the large chain to synthesize carbamoyl phosphate. See pfam00289. The small chain has a GATase domain in the carboxyl terminus. See pfam00117.
Statistics
?
PSSM-Id: 425975
Aligned: 621 rows
Threshold Bit Score: 149.397
Created: 26-Apr-2021
Updated: 29-Sep-2021
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
5DOT_A           37 IVLEDGTKMKGYSFGhPSSVAGEVVFNTGLGGYPEAITDPAYKGQILTMANPIIGNGGApdttal--delglsKYLES-N 113  human
jgi:UWK_03052    21 LALEDGSIYHGYSIGfTRDTMGEVVSNTGMTGYQEILSDPSYSGQLITLTYPEIGNTGVn------------pADMES-R 87   Desulfocaps...
jgi:Mmc1_3019    11 LVLEDGTRFDGRSLGaQTEQVGEVCFNTSMTGYQEIMSDPSYAGQIVTMTYTQIGNVGIn------------pEDMES-R 77   Magnetococc...
jgi:Bfae_14760   24 LILEDGTVLHGSAYGaRGSRLGEVVFTTGMTGYQETLSDPSYAGQIVVQTAPHIGNTGAn------------aQDMES-R 90   Brachybacte...
WP_020976335     21 VVLANGKTYRGFAFGaQGTTLGEAVFTTGMTGYQETMTDPSYHRQIVVCTAPQIGNTGWn------------dEDGESrN 88   Corynebacte...
CAQ04928          9 LVLADGTIYRGFAMGaTGKTLGEAVFTTAMTGYQETLTDPSFHRQITVLTAPQIGNTGWn------------dEDSESrD 76   Corynebacte...
Q8FT41           26 LVLADGRTFKGFGFGaIGTTLGEAVFTTAMTGYQETMTDPSYHRQIVVATAPQIGNTGWn------------eEDNEShD 93   Corynebacte...
WP_015749389      7 LVLEDGTVYHGEGFGaSGTAFGEAVFTTGMTGYQETLTDPSYRRQVVVATAPQIGNTGWvagsgsadgagygvSDDES-G 85   Nakamurella...
jgi:Shel_13220   40 LVLEDGTAFVGTSCGaAGEATGEICFNTSLEGYLEVITDPSYAGQIVTMTYPQIGNYGVn------------lDDTQS-A 106  Slackia hel...
jgi:Olsu_0781    15 LALEDGTVLEGRSCGaRGEAFGEIVFNTSMTGYQEIVSDPSYAGQIVTLTYPQVGNYGVn------------eGCMQS-G 81   Olsenella u...
5DOT_A          114 -GIKVSGLLVLDYSkDYNHWLATKSLGQWLQEEKVPAIYGVDTRMLTKIIRDKGTMLGKI 172  human
jgi:UWK_03052    88 -GIFARGLIVHDYN-IHSNWRAKEPLSSWLTRSKVPAIGGIDTRALTIRLRDKGTLKGYL 145  Desulfocapsa sulfexigens DSM 10523
jgi:Mmc1_3019    78 -RPWIRGFIVKESArRFSSWRAQESLSVFLTRHNIPAIEGIDTRALVSHLRDKGAMRGVL 136  Magnetococcus marinus MC-1
jgi:Bfae_14760   91 -KVWVRGYAVRDASrISSSYRAEQTLDELLISSDVVGISDIDTRMLTRLLRENGSLRGGI 149  Brachybacterium faecium DSM 4810
WP_020976335     89 dQIWVAGLVIRDLAqRVSNWRSARSLEEEMKSQGIIGIRGVDTRALTRALRSEGSIAAGI 148  Corynebacterium argentoratense
CAQ04928         77 gKIWSAGLVIRDLSnTVSNWRAKRSLNEELEEQGIVSICGVDTRSVVRHLREEGSIAAGI 136  Corynebacterium urealyticum DSM...
Q8FT41           94 gSIWVAGLVIRDLAvRVSNWRATTTLQEEMAKQGVVGIGGIDTRALVRHIRNEGAVPAGI 153  Corynebacterium efficiens YS-314
WP_015749389     86 -AIWVAGFVVRDLApRPSNWRATSSLPEEMARQGIVGIAGVDTRALTRRLRTAGAMRCGI 144  Nakamurella multipartita
jgi:Shel_13220  107 -KPALRGLVVNNMCrTPSNWRSAQSLPDFLVEHNIVAIEGIDTRALVRHIRDHGAQKAII 165  Slackia heliotrinireducens DSM ...
jgi:Olsu_0781    82 -SPRLRALVVRDMChAPSNWSSQTSLPDFLCGHGVVAMEGVDTRALTLRIRSAGAMRACV 140  Olsenella uli DSM 7084
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap