Conserved Protein Domain Family
RNA_helicase

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pfam00910: RNA_helicase (This model is not part of the current CDD release)
RNA helicase
This family includes RNA helicases thought to be involved in duplex unwinding during viral RNA replication. Members of this family are found in a variety of single stranded RNA viruses.
Statistics
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PSSM-Id: 513846
Aligned: 99 rows
Threshold Bit Score: 58.7858
Created: 12-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q7T7T5  542 LFFSGPA-GQGKSALCNLliraieghsnflgtrglspeeieDILAQETFV-HNCSATKWlSGYQ-SQKVMMFEDMCNSK- 617  Heterosigma akashiw...
Q9Z0D5  169 LWVYGPQgGEGKTSKAKE-----------------------LITRGWFYTrGGKKDDVA-YSYVeDPTRHVVFDIPRDM- 223  Milk vetch dwarf C1...
O91250  168 IWVYGPHgGEGKSAFAKYl----------------------TLKEGWWYTaGGKATDML-YSYSlDPTCHVCIDIPRCTr 224  Faba bean necrotic ...
Q83030  171 IWVYGPNgGEGKSTFARYl----------------------SLKPGWGYInGGKTSDMM-HIITmDPDNHWIIDIPRSH- 226  Banana bunchy top v...
Q9Z0D3  170 IWVYGPKgGEGKSTFARYl----------------------SLKQGWGYLpGGPTHDML-HIISgEPKNNWVFDIPRVA- 225  Milk vetch dwarf C3...
Q87009  168 IWVYGSDgGEGKTSFAKE-----------------------LIRYGWFYTaGGKTQDVL-YMYAqDPERNIAFDVPRCS- 222  Subterranean clover...
P0CK61  168 IWVYGPNgNEGKSQFGKFl----------------------GLKKDYLYLpGGKTQDMT-YMLMkNPKANVVMDIPRCN- 223  Faba bean necrotic ...
Q66005  177 LWICGRDgGDGKSVFAKYl----------------------GLKPDWFYTcGGTRKDVL-YQYIeDPKRNLILDVPRCN- 232  Coconut foliar deca...
Q9IR51  176 IWVYGPQgGEGKTSYAKHl----------------------VKTRDAFYStGGKTADIA-FAWD--HQELVLFDFPRSF- 229  Milk vetch dwarf vi...
Q8QTK7  176 IWVYGPNgGEGKTTYAKHl----------------------MKTKNAFYSpGGKSLDIC-RLYN--YEEIVIFDIPRCK- 229  Banana bunchy top v...
Q7T7T5  618 NTgqgdssPLNFLIGAVNNNTAFTDQADVDSKGcvpyaaEMVLVSSNT 665  Heterosigma akashiwo RNA virus SOG263
Q9Z0D5  224 QEycnyslIEMLKDRIIISNKYEPITNCQVYN-------IHVIVMANF 264  Milk vetch dwarf C1 alphasatellite
O91250  225 EEyinysvIEQIKNRVIINTKYEPCTIRDDGHN------VHVIVFCNF 266  Faba bean necrotic yellows virus (isolate SV292-88)
Q83030  227 SDylnygvIEQIKNRVLINTKYEPCVIRKDGQN------VHVIVMANV 268  Banana bunchy top virus
Q9Z0D3  226 SEyvnygvLEQVKNRVMVNTKYEPIVIRDDNHP------VHVIVFANC 267  Milk vetch dwarf C3 alphasatellite
Q87009  223 SEmmnyqaMEMLKNRVFASTKYRPVDLCIRKL-------VHLIVFANV 263  Subterranean clover stunt C2 alphasatellite
P0CK61  224 SEylnyqfMELIKNRTIYSYKYEPVGCIINNK-------IHVIVLANV 264  Faba bean necrotic yellows virus (isolate SV292-88)
Q66005  233 LEylnyalLECVKNRAFSSDKYEPLSYLGFDH-------VHVLVFANV 273  Coconut foliar decay virus
Q9IR51  230 EEyvnygvIEQLKNGIIQSGKYQSVIKYSDY--------VEVIVFANF 269  Milk vetch dwarf virus (isolate 1)
Q8QTK7  230 EEylnyglLEEFKNGIIQSGKYEPVLKIVEY--------VEVIVMANF 269  Banana bunchy top virus
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