2IXJ,1DZR,1EPZ,2IXC,6NDR


Conserved Protein Domain Family
dTDP_sugar_isom

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pfam00908: dTDP_sugar_isom 
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dTDP-4-dehydrorhamnose 3,5-epimerase
This family catalyze the isomerisation of dTDP-4-dehydro-6-deoxy -D-glucose with dTDP-4-dehydro-6-deoxy-L-mannose. The EC number of this enzyme is 5.1.3.13.
Statistics
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PSSM-Id: 425941
Aligned: 689 rows
Threshold Bit Score: 112.47
Created: 26-Apr-2021
Updated: 29-Sep-2021
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2IXJ_A                  15 ILFEP-RVFGDDRGFFFESYNQRAFEEAc---GHPV-S-----FVQDNHSRSARGVLRGLHYQIR-QAQGKLVRATLGEV 83  Pseud...
CCA60467                13 FLFEP-TPYADERGFFCRTFDADVVRSV----GLDPgA-----FVQDSVSRSVRGVLRGLHLRSG-AGEAKLVRCSYGRI 81  Strep...
EHR48895                13 YRFEP-TPHADERGFFSRTFDAGVARSV----GIDPdA-----FVQDSLSRSHAGVLRGMHLRVG-AGEAKLVRCSFGAV 81  Sacch...
jgi:Sros_0651           12 LLFVP-TPHRDDRGLFTRTFDKAVAEGA----GLDFsA-----FVQDSQSRSRQGTVRGMHGRSG-RGEAKLVRCARGAV 80  Strep...
PRJNA261003:LJ00_29545  12 LVLVP-EPFRDERGLFTRTFDAHIFDDHlgrpGV-SaS-----FVQDSQSRSSQGVVRGMHGRSE-RGEAKLVRCAHGAV 83  Mycol...
goetting:GPOL_c11480    12 LVLTP-EPHRDERGLFTRTFDAEIFDEYlgrpGT-AaA-----FVQDSQSRSSAGVIRGMHGRSG-HGEAKLVRCAHGAV 83  Gordo...
jgi:Psed_1893           12 LLFVP-TPFRDGRGLFTRTFDTAIAAEH----GVDLgP-----RAQDSQSRSWRGTVRGMHGRRG-RGEAKLVRAAHGAV 80  Pseud...
jgi:Gobs_0366           12 VCFLPeTRHEDERGWFVRTLDVAVADRA----GVDArA-----FLQDSQSRSRQGVLRGMHGRAG-AGEAKLVRCARGAV 81  Geode...
Q0P8I4                  17 YIITP-NKFRDLRGEIWTAFTDEYLSKL---------VpdgikFKHDKFINSHFNVLRGIHGDVKtY---KLVTCVYGEV 83  Campy...
CCB88549                21 LLITPpTIFDDFRGDFVEIYNQELYQNA----GITA-E-----FVQDDYATSTKHVLRGIHGDDKt---GKLVKCLYGTL 87  Simka...
2IXJ_A                  84 FDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEYAEFLYKTT-D-F-WAPEHERCIVWNDPELKIDWP 160 Pseud...
CCA60467                82 FDVVVDLRADSPTYRNVATFELSGETQRTLYVPAGCAHGFQALTDTADTSYRID-R-P-HDPAEDVTIAFDDPELAIPWP 158 Strep...
EHR48895                82 FDVVVDLRVDSPTYRNVTSFELSGDTQVTLYVPAGCAHGFQALTEPADVSYRID-R-E-HDPTEDVTIAFDDPALGITWP 158 Sacch...
jgi:Sros_0651           81 HDVLVDARPGSPTFGEQTSVLLDDETFVTLYVPPGLLHGFQALTGQTDVCYRID-R-E-HDPAEDLSVRYDDPDLRIDWP 157 Strep...
PRJNA261003:LJ00_29545  84 HDVLVDIRPDSPTFGRQQAFLLDDKDFRHLYVPPGFLHGFQALTAIADVCYRID-R-P-HDPSEDLAVAYNDPDLGIDWP 160 Mycol...
goetting:GPOL_c11480    84 HDVVVDIRPDSPTFGHHQSFRLDDEEFTNLYIPPGFLHGFQAL-DIADVCYRID-R-P-HDPAEDIGVAFDDPDLAIAWP 159 Gordo...
jgi:Psed_1893           81 HDVLVDARPSSPTFGVVAAFRLDDEDFHHLYVPPGLLHGFQALTDVADVCYRID-R-P-HDPSEDVGVAHDDPDLAIAWP 157 Pseud...
jgi:Gobs_0366           82 LDVLVDTRPSSPTFGRSATFRLDDETGRHLYVPPGFLHGFQVLTPEADVCYRID-R-E-HDPSEDLAVRYDDPDLALPWP 158 Geode...
Q0P8I4                  84 HQVVVDCRKDSPTYLKWEKFIISYKNQQLILLPPNMGNSHYVSSKEAVYYYKLAyEgEyMDAPDQFTYAWNDERIGIDWp 163 Campy...
CCB88549                88 YMLIVNNDSSSKEYKEWTSFTLNCRNHSQLYIPPKFGTSYLVMSDKAILHYKQT-A-Y-YHNAKQFTIKWNDPEYDFWWP 164 Simka...
2IXJ_A                 161 LQDAplLSEKDRQGKAFA 178 Pseudomonas aeruginosa
CCA60467               159 LPATs-MSPRDREAPRLA 175 Streptomyces venezuelae ATCC 10712
EHR48895               159 LPVTs-MSERDRRAPGLA 175 Saccharomonospora marina XMU15
jgi:Sros_0651          158 LPVSa-ISGRDLSAGSWT 174 Streptosporangium roseum DSM 43021
PRJNA261003:LJ00_29545 161 LPVTm-VSPRDAGAGSWS 177 Mycolicibacterium smegmatis MC2 155
goetting:GPOL_c11480   160 APVSv-VSPRDRSAGSWR 176 Gordonia polyisoprenivorans VH2
jgi:Psed_1893          158 LPLGp-ISDRDRAAGSWA 174 Pseudonocardia dioxanivorans CB1190
jgi:Gobs_0366          159 LPVTa-ISPRDAAAGTWH 175 Geodermatophilus obscurus DSM 43160
Q0P8I4                 164 tn-tpiLSDRDI-----L 175 Campylobacter jejuni
CCB88549               165 ISnp-iTSERDYpfntr- 180 Simkania negevensis Z
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