1DZT,2IXK,1EP0,6NDR,7PVI,3RYK,1PM7,2C0Z,8DAK


Conserved Protein Domain Family
dTDP_sugar_isom

?
pfam00908: dTDP_sugar_isom (This model is not part of the current CDD release)
dTDP-4-dehydrorhamnose 3,5-epimerase
This family catalyze the isomerisation of dTDP-4-dehydro-6-deoxy -D-glucose with dTDP-4-dehydro-6-deoxy-L-mannose. The EC number of this enzyme is 5.1.3.13.
Statistics
?
PSSM-Id: 513844
Aligned: 587 rows
Threshold Bit Score: 139.451
Created: 12-Feb-2025
Updated: 28-Apr-2025
Structure
?
Program:
Drawing:
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
1DZT_A         13 LILEP-KVFGDERGFFFESYNQQTFEELiG--RKVT-----FVQDNHSKSKKNVLRGLHFQRGeNAQGKLVRCAVGEVFD 84  Salmonella ent...
WP_024082299   12 LTVTP-GIFEDYRGYYVETYNQHDYQAA-GiaVP-------FVQDDISVSRRGVLRGLHGDAKt---WKLISCLSGEIYL 79  Magnetospirill...
Q0P8I4         17 YIITP-NKFRDLRGEIWTAFTDEYLSKL-------VpdgikFKHDKFINSHFNVLRGIHGDVKtY---KLVTCVYGEVHQ 85  Campylobacter ...
WP_013943016   21 LLITPpTIFDDFRGDFVEIYNQELYQNA-G--ITAE-----FVQDDYATSTKHVLRGIHGDDKt---GKLVKCLYGTLYM 89  Simkania negev...
Q3A5H9         14 YEILP-AVLGDERGSFIKTFHAPAFSRH-G--LCTD-----WREEYFSVSQQGVLRGLHFQTPpHDHAKLVYCVGGAVLD 84  Pelobacter car...
WP_013387264   12 FIIED-FHVEDERGSFTKTYNRSLFKNN-K--LKGK-----FKESFYSVSKRDVIRGMHFQLPpHDQDKMVYVTRGKIID 82  Ilyobacter pol...
CDA93970       12 YVLET-VHFKDERGGFQKLFNEDFFREN-G--LDTD-----FREFYYSVSHRDVIRGMHFQLPpFDHTKLVYVSQGHILD 82 
44_pfamImport   8 YILET-VDFQDERGCFQKLYNYDFFKEN-D--LDTD-----FKEFYYSVSRKDVIRGMHFQLPpFDHTKLVYVSKGKIRD 78 
WP_006655998   12 YILKR-SMFKDNRGEFIKHFSEECFRQN-S--LDTD-----FKESYYSVSKKGVLRGMHFQLPpYEHTKLVYVSSGKILD 82  Helicobacter c...
WP_015707828   13 YILTN-QIFYDSRGSFKKVFTETDFKSL-S--LESN-----FSELYYSINKKDVIRGMHFQVPpMDHVKMIYVITGKIVD 83  Treponema prim...
1DZT_A         85 VAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSEYAEFLYKAT-N-Y-YSPSSEGSILWNDEAIGIEW--- 158 Salmonella ent...
WP_024082299   80 AVLDCRDCSPTKGAWQGFTISDRNRMQVLVPPGVANGHAILSERAIFHYKQS-E-Y-YDPGSQFTVKWNDPAHGIWW--- 153 Magnetospirill...
Q0P8I4         86 VVVDCRKDSPTYLKWEKFIISYKNQQLILLPPNMGNSHYVSSKEAVYYYKLAyEgEyMDAPDQFTYAWNDERIGIDWptn 165 Campylobacter ...
WP_013943016   90 LIVNNDSSSKEYKEWTSFTLNCRNHSQLYIPPKFGTSYLVMSDKAILHYKQT-A-Y-YHNAKQFTIKWNDPEYDFWW--- 163 Simkania negev...
Q3A5H9         85 AVVDLRRESPDYGQHATIELNPDKANMLYIPAGMAHGFYVLRGPATMMYKVS-T-V-YSPGHDRGILWNS--AGIPWpd- 158 Pelobacter car...
WP_013387264   83 VILDLRKKSKTYGQVFSIELSEEKRNSLYIPKGCAHGFKSLEDDSTVVYDVT-T-V-HSPESDSGIRWDS--FGYDWkt- 156 Ilyobacter pol...
CDA93970       83 VVVDLRKSSPTFRQYFSVELDDEKAQYLYIPKGFAHGFRSLRDGSVVNYAQT-S-C-YSREHDAGVAYDS--IGFDWgv- 156
44_pfamImport  79 VVVDLRQKSATFGMFFSLEMDERAARYLYIPRGLAHGFLALEEGSIVNYAQT-S-C-YAKDQDCGIAWDS--FGFDWgi- 152
WP_006655998   83 VVVDIRLHSSTFGLFFKIVLSSKKSSFLYIPKGFAHGFLCLEDNTRVHYLQT-S-V-YSKNHDSGILYDS--FGFNWlee 157 Helicobacter c...
WP_015707828   84 VCLDLRQTSKTFGEYFSYTLSGNDADYLYIPKGIAHGFASLENNTIVHYAQT-T-C-YSKEHDFGIKYDS--FGFNWni- 157 Treponema prim...
1DZT_A        159 --------PFsqlpeLSAKDAAAPLLD 177 Salmonella enterica subsp. enterica serovar Typhimurium
WP_024082299  154 --------PLsd-piLSQRDR------ 165 Magnetospirillum gryphiswaldense
Q0P8I4        166 ------------tpiLSDRDI-----L 175 Campylobacter jejuni
WP_013943016  164 --------PIsn-piTSERDYpfntr- 180 Simkania negevensis
Q3A5H9        159 ------dnPL-----ISPRDAAFEAFC 174 Pelobacter carbinolicus DSM 2380
WP_013387264  157 ------niPL-----MSEKDKNLMEFS 172 Ilyobacter polytropus
CDA93970      157 ------dkPI-----VSGRDTTFPRLD 172
44_pfamImport 153 ------qrPI-----VSGRDLTFEKLE 168
WP_006655998  158 sskyevknLI-----ISQRDLSFESLK 179 Helicobacter canadensis
WP_015707828  158 ------qdPI-----ISDRDKVFSNFK 173 Treponema primitia
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap