1H6F,1H6F,4A04,1XBR,5T1J


Conserved Protein Domain Family
T-box

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pfam00907: T-box (This model is not part of the current CDD release)
T-box
The T-box encodes a 180 amino acid domain that binds to DNA. Genes encoding T-box proteins are found in a wide range of animals, but not in other kingdoms such as plants. Family members are all thought to bind to the DNA consensus sequence TCACACCT. they are found exclusively in the nucleus, and perform DNA-binding and transcriptional activation/repression roles. They are generally required for development of the specific tissues they are expressed in, and mutations in T-box genes are implicated in human conditions such as DiGeorge syndrome and X-linked cleft palate, which feature malformations.
Statistics
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PSSM-Id: 513843
Aligned: 89 rows
Threshold Bit Score: 170.048
Created: 12-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1H6F_A         7 VHLEAKELWDQFHKRGTEMVITKSGRRMFPPFKVRCSGLDKKAKYILLMDIIAAD-DCRYKFHNSRWMVAGK-AD-PEmP 83  human
9_pfamImport   1 VALQDRQLWKEFDTLCNEMIITKIGRNLFPIIEYAFKGLQEHVEYQVGVTMQLTNcQ-KLKFTAGKWDPLDVpEEvF--- 76 
Q1T6W8         5 VALMEKSLWREFDSQCNEMIITKIGRNLFPILEFAFKGLCEHLNYKIGVTMEPISyQ-KLKFTAGRWESLDIqEEmV--- 80  Caenorhabditis ...
EFP02532     146 VALLDKALWREFDAQCNEMIITKIGRNLFPILEVSFKGLNEHLHYRIGVTMEPTViQ-KLKFTGGRWEKLDVmEDmV--- 221
XP_045095674   8 VALMEKALWKEFDDHRNEMIITKIGRNLFPILEFAFKGLIEHQMYRIGITMEPTIfQ-KLKFTAGRWEKLDIlEDlI--- 83 
2_pfamImport   1 LSSNTDALWRNCFELTNEMNITAPGRRVFPTLEYIVTGLDPSKYYVISMHFEFMD-DKKLRFVGGKWTESPS-TEeK--G 76 
5_pfamImport   1 LSMSTDSLWRECFALEHEMILTVSGRRIFPTLEFVIAGLNPSKTYSACFHLEQVD-DKRLRFTNKCWQETLS-TEtR--E 76 
Q20257         9 LSSTTDPLWRSCHEYDNEMVITVNGRRIFPTLEYTVTGLDTFKLYSMCMHLDLVD-DKKLRFTGGQWAESVS-TEkK--D 84  Caenorhabditis ...
Q22289         8 IEGSQETLWKIFHAEVNEMIVTKNGRKLFPKLEYIVEGLDENKLYAIMLQLQPVG-ESRFKFSGGKWQETGK-AE-KQ-V 83  Caenorhabditis ...
XP_003092726   9 LKEEQDRLWKLFHSHRNEMIVTKFGRKMFPKLDYVIRGLNQNKLYAMMLHIEQSD-DCRYKFSSGEWMKSGK-AE-QH-K 84 
1H6F_A        84 K-RMYIHPDSPATg----------EQWMSKVVTFHKLKLTNNISDK--H--GFTILNSMHKYQPRFHIvR-----ANDIL 143 human
9_pfamImport  77 -----------QPneifmakpksgRELMQRGLKLDKLKLTNTKEAVvkNdqM-IRVQSMRQYIPVLHIy--------EVV 136
Q1T6W8        81 -----------QPnevfl--mksgRELLQRGLKLEKLKLTNSKDALqkSdqM-IRVQSMRQYMPVLNIy-------EISP 139 Caenorhabditis ...
EFP02532     222 -----------QSnevfy--vksgRELLQRGLKLEKLKLTNSKDALqkSdqM-IRVQSMRQYVPVLNIy-------EATP 280
XP_045095674  84 -----------TTnevff--vksgRELLHRGLKLEKLKLTNSKDAVqkNdqM-IRVQSMRQYIPILNIy-------EDLP 142
2_pfamImport  77 VpRIVFHKDGAQLg----------KDWMDKPLSFDQIRVTNRKSDQhkGpsF-VYLLTQHRYIPVLTIl----------- 134
5_pfamImport  77 TpRKVWHQQGAQSg----------SEWMCRPITFDHVRITNKKSKEqgNasY-IHLHTQHRYIPVLQIf----------E 135
Q20257        85 PpRKVWHHNGSQTg----------KDWMLRNVSFDQIRITNRKSKEdgNasY-VHLLTQHRYIPVLTIy----------- 142 Caenorhabditis ...
Q22289        84 DaKKMWHADGVRKg----------SDWMWSSICFDRVKISNYSESNn-A--SMIYLNSMHKYIPVLTIyEspsesPFCVP 150 Caenorhabditis ...
XP_003092726  85 EpKKLWHPDGVRSg----------KDWMANPICFDSVKITNIVDSSn-A--SMIFLHSMHIYTPVLSVyEsqsetPMGIP 151
1H6F_A       144 KLPYSTFRTYL--FPETEFIAVTAYQNDKITQLKIDNNPFAKGFRD 187 human
9_pfamImport 137 ATGVRLVGKYE--FAETKFVAVTAYQSERVKQLKVQRNKFAQGFRE 180
Q1T6W8       140 VGAHNQIGKFQ--FPETKFIAVTAYQSELVKQLKVQKNKFAQGFRE 183 Caenorhabditis elegans
EFP02532     281 TGATVHVGRFP--FVEAKFIAVTAYQSEQVKCLKVQKNKFAQGFRE 324
XP_045095674 143 NGAHMQIGKYK--FTETKFIAVTAYQSEKVKNLKVQKNKFAQGFRE 186
2_pfamImport 135 ---EGDQIVHIskIDYTSFITVTAYHNNALNQLKTENNPYATGSRQ 177
5_pfamImport 136 CSPESSSLVSVtkIAHSQFITVTAYHKPEINTLKTNNNPYSTGSRK 181
Q20257       143 ---EGDQLVHTarIPHSQFISVTAYHKGELNTLKTNNNPYSTGSRK 185 Caenorhabditis elegans
Q22289       151 QSSNQIVATAK--FPHTEFIAVTAYQNQKITDLKIKHNSFAKGFRD 194 Caenorhabditis elegans
XP_003092726 152 QPSTRLVTSVR--LDYTEFIAVTAYQNDALIKLKIQFNPFAKGFRE 195
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