1DNP,3FY4,3UMV


Conserved Protein Domain Family
DNA_photolyase

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pfam00875: DNA_photolyase (This model is not part of the current CDD release)
DNA photolyase
This domain binds a light harvesting cofactor.
Statistics
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PSSM-Id: 513817
Aligned: 65 rows
Threshold Bit Score: 106.169
Created: 12-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1DNP_A         4 LVWFRQDLRLHDNLALA----AA----CRNSsARVLALYIATPRqwaTHNM--------SPRQAE--LINAQLNGLQIAL 65  Escherichia coli
Q2S1Q9        24 LYWMEQSQRAQHNPALEralhHA----SETG-LPLLVVCGVTDDf-------------pEATLRHhtFLLEGLQETKQRL 85  Salinibacter ru...
P12769        23 VYWMQASVRSHWNHALEyaieTA----NSLK-KPLIVVFGLTDDf-------------pNANSRHyrFLIEGLRDVRSNL 84  Methanothermoba...
Q72FV1        20 LYWMHREHRAHDNWALV----HAigeaKAAG-APLAVVWCLSPR---FLDA--------AYRQFH--FLLRGMRGTAETL 81  Desulfovibrio v...
Q6AK21        28 VYWVSRDQRVRDNWALLwaqqEA----ISRQ-KGLLVVFCLVPDy-------------lGAKSSQylFMLRGLARMQKKL 89  Desulfotalea ps...
Q8TIS6        20 AYWMSRDQRVEDNWALLfaqvIA----QEAN-VPVVVVFCLIEGf-------------lGAGRRHyeFMLKGLQELEEAL 81  Methanosarcina ...
XP_001420955  29 VYWCDRDRRCANNDALGrameLA----NERR-VPLVVAMHVGTDlsgs--------gigGARRAV--FALKGLKELDEDL 93 
Q6F6A2        41 VYWMLRDQRLADNWALL----HAaglaAASA-SPLAVAFALFPR---PFLL--------SARRRQlgFLLRGLRRLAADA 104 Japanese rice
XP_001417095  30 VYWLSRDQRVRDNWALLracdVA----RAND-APVVIAFNLLTKf-------------lGAGARQfgFMLRGLRELEGAA 91 
Q3IPX9         5 VVWFRDDLRVTDNPTLA----DA----VAAA-ETVIPVYTFDPD---RYTEseygppktGGHRAV--FRRQAVADLRASL 70  Natronomonas ph...
1DNP_A        66 AEKGIPLLFREV-DdfvaSVEIVKQVCAENSVTHLFYNYQYEVNERARDVEVERALRn----VVCEGFDDSVILPPGAVM 140 Escherichia coli
Q2S1Q9        86 ADRGLKLVVREG-A----PDDVALAHAG--AAAVLVTDRGYLRHQKQWRARVAEEAP-----CRVEQVEGDVVVPVETV- 152 Salinibacter ru...
P12769        85 RERGIQLVVERD-S----PPSVLLKY--ADDAAAAVTDRGYLDIQKEWVDEAAGALH-----IPLTQVESNVIVPVETA- 151 Methanothermoba...
Q72FV1        82 REHGIPFFLLQG-D----PADEVPRFAATHGTGLVVTDFDVLRLKRAWLGQVREALA-----CPLHEVDGRNVVPCRMAS 151 Desulfovibrio v...
Q6AK21        90 HEMNIHFTLFEQ-S----PDDILPGFLRQIDAHLLVSDFDPLRIKRQWTEQLIAQVV-----TPIYQVDTHNIIPAWMV- 158 Desulfotalea ps...
Q8TIS6        82 SRKKIPFYFLRG-D----PGQKIPEFVKEYEVGTLITDFSPLRIKAEWVGKIISAIE-----IPFFEVDAHNVVPCWEA- 150 Methanosarcina ...
XP_001420955  94 RARGVSTRTTTGsD----VAGGIVETCETLNASAVVCDFSPLREGRAAREAVARVVe-----VPVIEVDAHNVVPAWVT- 163
Q6F6A2       105 AARHLPFFLFTG-G----PAE-IPALVRRLGASTLVADFSPLRPVREALDAVVGDLRreapgVAVHQVDAHNVVPVWTAS 178 Japanese rice
XP_001417095  92 KAKNVTFAMTYGdE----PAIAIDALAKKIGAKTIVCDFSPLRDGLKWRKELAALCEar--sAHCEECDAHNVVPCWEA- 164
Q3IPX9        71 RDRGGDLLVRSG-R----PATVVPELAQRAGADAVYAQTKPATEERRRAADVASALDda--gIALRQRWTHTLYHPDDL- 142 Natronomonas ph...
1DNP_A       141 TGNH-EMYKVFTPFKNAWLKRLREGMPE 167 Escherichia coli
Q2S1Q9       153 TDKAeYAARTIRPKIHEHLERCLQLPEP 180 Salinibacter ruber DSM 13855
P12769       152 SDKEeYSAGTFKPKIKRHLKRFMVPLRM 179 Methanothermobacter thermautotrophicus str. Delta H
Q72FV1       152 DKRE-YAARTLRPKIHRLLPEYLDPFPS 178 Desulfovibrio vulgaris str. Hildenborough
Q6AK21       159 SDKKeYAAYTIRPKIKRLLDDFLTDIPP 186 Desulfotalea psychrophila
Q8TIS6       151 SPKQeYAAHTFRPKLYGHLSEFLEEFPE 178 Methanosarcina acetivorans
XP_001420955 164 SDKQeYAARTIRPKIHRNLGDFLTAPQA 191
Q6F6A2       179 AKME-YSAKTFRGKVSKVMDEYLVEFPE 205 Japanese rice
XP_001417095 165 SDKLeVGARTLRGRLAKRYPEFLHEFPE 192
Q3IPX9       143 PTPPtDIDDTFTPWRKETEAAATVRDPR 170 Natronomonas pharaonis DSM 2160
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