8QZM,2NAS,1RI0,4RXJ


Conserved Protein Domain Family
PWWP

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pfam00855: PWWP (This model is not part of the current CDD release)
PWWP domain
The PWWP domain is named after a conserved Pro-Trp-Trp-Pro motif. The domain binds to Histone-4 methylated at lysine-20, H4K20me, suggesting that it is methyl-lysine recognition motif. Removal of two conserved aromatic residues in a hydrophobic cavity created by this domain within the full-length protein, Pdp1, abolishes the interaction o f the protein with H4K20me3. In fission yeast, Set9 is the sole enzyme that catalyzes all three states of H4K20me, and Set9-mediated H4K20me is required for efficient recruitment of checkpoint protein Crb2 to sites of DNA damage. The methylation of H4K20 is involved in a diverse array of cellular processes, such as organising higher-order chromatin, maintaining genome stability, and regulating cell-cycle progression.
Statistics
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PSSM-Id: 513800
Aligned: 185 rows
Threshold Bit Score: 36.2568
Created: 12-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
8QZM_K        296 GELVWGK-LRGFSWWPGRIVSWWMTGRSraaegt-------------------------rwvmwfGDGKFSVVCVEKLMP 349  human
XP_002966918  157 GQLVWAK-FSRSPWWPAQVADEKSMSERtrqsknh------------------------vlvrffGNYNYGWV-----DP 206 
Q6ZJC9         33 GDITWVK-HTGS-WWPAQVVENSCISSKpkktakh-----------------------hvpvrlyGTCVHMYV-----DP 82   Japanese rice
XP_010664400   32 GDLIWVR-LRGLSWWPAQVVNENAVSRSnkpgnrse---------------------devlvrvyGTYNYLYV-----DP 84  
XP_002306537   33 GDVMWVRrDDDGTWWPAVVVNNNNISETskprnssm---------------------gdvlvrlyGSYQYFYA-----DP 86  
Q2HAC7        164 GDHYFVK-LKGFPQWPVIICDEDMLPASllksrpvtakradgtyredyadggknvadrtfpvmylHTNEFGWVPNTELIK 242  Chaetomium gl...
XP_014170451 2415 GDHYFVK-LKGYPAWPVIICDEDMLPQTlvksrpvsaarqdgtyredyadggkraadrtfpvmylFTNEFGWVPNQDMHD 2493
XP_008090364  146 GDHFLVK-LKGYPQWPVIICDEEMLPETllksrpvtakradgtyredyadggkrqndrtfpvmylRTNEFGWVPNSALQE 224 
XP_003054143  188 GDHFLVK-LKGFPAWPAIICDESMLPQAlvvnrpvtaarrdgtyneayadggkrvndrsfpvmylYTNEFGWVPNTSLTE 266 
XP_007810497  141 GDHFLVK-LKGFPAWPAIICDEDMLPHAlvtsrpvsaarpdgtyaeafadggkrvndrtfpvmylHTNEFGWEKNTNLSE 219 
8QZM_K        350 LSSFCSAFHQATYNK---QPmyrKAIYEVLQVAS 380  human
XP_002966918  207 ASDLSKFDVDFDGRSqvpTKafqKGLKEALEYRD 240 
Q6ZJC9         83 WKSNMEFKMMLKRENksaMEafhEAVKKELSHVN 116  Japanese rice
XP_010664400   85 MKCRSEFENILKQNNcsyREifqKALEQDLPSAK 118 
XP_002306537   87 VKCRSEFEITLKENGgcySEmfvEALEQDLPQSK 120 
Q2HAC7        243 LDPETVLDVKLDKMRkt----lqAAHHLASENHP 272  Chaetomium globosum CBS 148.51
XP_014170451 2494 LDPSKVLEAVNDKMRkd----lqHAHKLAAESNP 2523
XP_008090364  225 LSSEKATELLTDKVKkve---lrDAFELAIEQHP 255 
XP_003054143  267 LTPEKASDSITEKMRkd----lrEAFELASQNNP 296 
XP_007810497  220 LSAEKAKETINDKMRkd----lkAAYELAIEHHP 249 
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