Conserved Protein Domain Family
Syntaxin

?
pfam00804: Syntaxin (This model is not part of the current CDD release)
Syntaxin
Syntaxins are the prototype family of SNARE proteins. They usually consist of three main regions - a C-terminal transmembrane region, a central SNARE domain which is characteristic of and conserved in all syntaxins (pfam05739), and an N-terminal domain that is featured in this entry. This domain varies between syntaxin isoforms; in syntaxin 1A it is found as three alpha-helices with a left-handed twist. It may fold back on the SNARE domain to allow the molecule to adopt a 'closed' configuration that prevents formation of the core fusion complex - it thus has an auto-inhibitory role. The function of syntaxins is determined by their localisation. They are involved in neuronal exocytosis, ER-Golgi transport and Golgi-endosome transport, for example. They also interact with other proteins as well as those involved in SNARE complexes. These include vesicle coat proteins, Rab GTPases, and tethering factors.
Statistics
?
PSSM-Id: 513760
Aligned: 61 rows
Threshold Bit Score: 138.436
Created: 12-Feb-2025
Updated: 28-Apr-2025
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Q84R43        39 DERLKGFFQETEAVEEEMAAIRDALARLNAANeeGKSLHQPDALRALRGRVNADIIAVLRRARDIRARLEAMDRANAAQR 118 Japanese rice
8_pfamImport   1 DQHLEAVLQEAQQVRLEIQAIQNDVGELRDVN--YQSLNETSFPAVTKRDSNSIGKEIKVRGEAVLRRLRVMDGRREEL- 77 
XP_011489942  44 SNTMEEILHEASLIRKSIILLSLDVERLKNNN--ERYGTSVSRFSILKRDSDSIARKIQQQGDSVYKRIQALGDRANELE 121
XP_004085546  42 EDEMDRIYKEAQVMQKEMLMLKLDVKRLGKQN--ARFLTSVRRISSIKRDSNALGRDIKARGEAIYARLEKLGKQSRELE 119
Q4REJ3        38 QEMMDGLHKEAQALRKEMQLLRADVRRLGKQN--ARFLTSVRRISSIKRDANALRRDIKERMDAIYARMETLKKQGKEQE 115 spotted green p...
XP_005998115  36 DELLCNLHKEVQLIQDKNQMLRVDIRRLGKQN--TRFLTSMRRLSSIKRDSNTIAKDIKSRGEDIYCRLQEIKTFSEEVE 113
XP_007484739  38 DHILESLYKDIQDIQTENHLLIVDVKRLGKQN--LRFLTSMRRLSSIKRDTNSIAKDIKTRGEAIHKKLQMMKTFCEVAE 115
NP_001008147  36 DHALESLYQDIQLIRTENHLMKVDVKRLGKQT--TRFLTSMRRLSSIKRDSNSIAKDIKTRAEGIHKKLQSLKNLSEDAE 113
XP_008121020 151 DYALASLYKDIQGIRTNNHHLNEDVRRLGKQN--TRFLTSMRRFSSIKRDANSIAKDIKARGEDIHRRLQVLRDFSEDAE 228
XP_029685948  38 DQHMDSVLQEAQQVRLEIQAIQNDISELRDVN--YQILNKTSFPTVTKRDSNQIGMDVKRRGEAVLHRLQMMNGLREELE 115 torafugu
Q84R43       119 RLSagcREGTPLDRTRTALTAALRKKLKDLMLDFQALRQRIMSEYKDTVERRYYTLtGEVPEEEVIERIISEGr-SEELL 197 Japanese rice
8_pfamImport  78 -----------------GQHRSLSSALRQVMSGYRDAEMSHREACKQQIRRQMEVV-GEEVTAEDLEEMLEGG--GWKVF 137
XP_011489942 122 QTE---GGNRAVSRIARIQYDTLAFALRSAMENYNSAEEKQREICKTRIQRQASII-GKDISDEQLNDLVNKGgeGWEEL 197
XP_004085546 120 EEH---GATSAVARMAGSQCVYLTNAFHEAMCEYNTAEMLQRENCKTRIQRQAEIM-GKEVSREQIEEMIETG--KCSLF 193
Q4REJ3       116 EQP---QSSAAVARMVQVQCVSLAAAFHEVVCEYNEAEMSQRENCLSRIQRQANIM-GKELSTEEMEEMMETG--KVNVF 189 spotted green p...
XP_005998115 114 QKH---GPNSALARIAKAHHVVLTYAFQEAMVEYNEAEMNQRENCKIRIQRQLEIM-GKDISGNQIEDMIEQG--KWDVF 187
XP_007484739 116 LKH---GANSAMARISKAQYNVLTWTFQQAMHDYNQVEMNQRENCKIRIQRQLEIM-GKDVSRAQIEEMCEEG--KWDVF 189
NP_001008147 114 NKS---GESSVMARVSKSQYMTLTLEFQEAMLEYNEAEMVQRENCKIRIQRQLEIM-GKDVSGNQIDDMIEQG--KWDVF 187
XP_008121020 229 TKY---GSNSIISRVSKDHYVDLMHAFQEAMFEYNKIEMNQRENCKVRIQRQLEIM-GKDVSGNQIEDIIEQG--RWDVF 302
XP_029685948 116 AER---GSADPTARIARTQYQWLSSALQQVMFSYNDAEMSHREACKQQIHRQLEVV-GKEVTKEELEEMLENG--ELNVF 189 torafugu
Q84R43       198 CAAV 201 Japanese rice
8_pfamImport 138 CPRL 141
XP_011489942 198 CQSL 201
XP_004085546 194 SDNL 197
Q4REJ3       190 ADNV 193 spotted green pufferfish
XP_005998115 188 SGNL 191
XP_007484739 190 SENL 193
NP_001008147 188 SENL 191
XP_008121020 303 SENL 306
XP_029685948 190 CPQV 193 torafugu
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap