1V9X


Conserved Protein Domain Family
zf-PARP

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pfam00645: zf-PARP 
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Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
Poly(ADP-ribose) polymerase is an important regulatory component of the cellular response to DNA damage. The amino-terminal region of Poly(ADP-ribose) polymerase consists of two PARP-type zinc fingers. This region acts as a DNA nick sensor.
Statistics
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PSSM-Id: 425795
Aligned: 186 rows
Threshold Bit Score: 55.0165
Created: 26-Apr-2021
Updated: 29-Sep-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1V9X_A         14 EYAKSSRSSCKT--CKSVINKENFRLGKl----VQSth------fdGIMPMWNHASCILKKTKQIKSVDD---------- 71   thale cress
Q4E4B2          7 EYAKSGRGKCSSsgCSQEIVKNEVRIGTaf-lfPAPggeqneagneRLCYKWRHLCCFTDIQLENARASGei-------- 77   Trypanosoma c...
Q38AV1          7 EYAKSGRAKCSAasCNKPISKHEVRVGIav-mfQPVgsts---gepTLSYKWRHVCCFTERQIKNAEAEGgl-------- 74   Trypanosoma b...
CAM43898       35 EYSKSGRAKCSNtsCGKKIEKHELRIGTev-imQFRde-------eIESWKWRHLCCFTERQLSNAKETGdi-------- 98   Leishmania br...
9_pfamImport    1 EYAASGRAKCKS--CEQKLLVQQLRVGVni-rhSIF-----------GDTTYYKVPGFAADEVEEEPDIGaaneksaktk 66  
EFO96920        7 KYEKSGETECPH--CGNKIEVDTLKMCRvk-hlIFPnrn-----swPHFHSWYHFDCFFDHINDDIYFTK---------- 68   Caenorhabditi...
XP_011445219  215 DYAKSDKSECKS--CATKIAKNALRVGFtg-kaNF------------GAVAWYHVDCLKKCPQEYSKGIKadkp------ 273  Pacific oyster
EIE79380       16 EYAKTQQSKCDS--CKKIIPNKSLRAAEiy-rkSPKek------knLARHTWYHFKCWKVPTLLTRIPIEq--------- 77   Rhizopus dele...
EFH59159       82 EYAKSNRSSCKS--CSKKIAVKSLRLGLi----SKGpg-------gVDMTRWHHFDCFPTDSESIASVDD---------- 138  Arabidopsis l...
PDM74065      359 KYEKDCNAKCTK--CKKTIPVGDVILGLresnaAGQ-----------HTDRWYHVNCFFVAMQAKGVGVTes-------- 417  Pristionchus ...
1V9X_A         72 ------VEGIESLRWEDQQKIRKYV 90   thale cress
Q4E4B2         78 ----ndIDGYSDLAPADQELVEK-L 97   Trypanosoma cruzi
Q38AV1         75 ----daIEGLEELAEVDRDLIAQMM 95   Trypanosoma brucei
CAM43898       99 ----daIQGEDDLAPADKALLQE-M 118  Leishmania braziliensis MHOM/BR/75/M2904
9_pfamImport   67 kgnddpIDGLSKLEPADQKRVREYM 91  
EFO96920       69 ------ISGIDSLPWKHQNLLQTRI 87   Caenorhabditis remanei
XP_011445219  274 --leelVDGFDKLNKDDQKKVEKEV 296  Pacific oyster
EIE79380       78 ------FRGYPTLQDKDKARVQKVI 96   Rhizopus delemar RA 99-880
EFH59159      139 ------IQGLSVLEKEDQDALTKLV 157  Arabidopsis lyrata subsp. lyrata
PDM74065      418 -----aIRGMSWLKWDDQESIRDQI 437  Pristionchus pacificus
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